| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4382 |
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| Symbol | rhaB |
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| ID | 6272467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 4090934 |
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| End bp | 4092349 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641728183 |
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| Product | rhamnulokinase |
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| Protein accession | YP_001882596 |
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| Protein GI | 187731756 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
[COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR02624] rhamnulose-1-phosphate aldolase
[TIGR02627] rhamnulokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTC GCAATTGTGT CGCCGTCGAT CTCGGCGCAT CCAGTGGGCG CGTGATGCTG
GCGCGTTACG AGCGTGAATG CCGCAGCCTG ACGCTGCGCG AAATCCATCA TTTTAACAAT
GGCCTGCATA GCCAGAACGG TTATGTCACC TGGAATGTGG ATAGCCTGGA AAGTGCCATT
CGCCTTGGAT TAAACAAGGT GTGCGAGGAA GGGATTCGTA TCGATAGCAT TGGGATTGAT
ACCTGGGGCG TGGACTTTGT GCTGCTCGAC CAACAGGGTC AGCGTGTGGG CCTGCCCGTT
GCTTATCGCG ATAGCCGCTC CAATGGCCTA ATGGCGCAGG CACAGCAACA ACTCGGCAAA
CGCGATATTT ATCAACGTAG CGGCATCCAG TTTCTGCCCT TCAATACGCT TTATCAACTG
CGTGCGCTGA CGGAGCAACA ACCTGAACTT ATTCCACACA TTGCTCACGC TCTGCTGATG
CCGGATTACT TCAGCTATCG CCTGACCGGC AAGATGAACT GGGAATATAC CAATGCCACC
ACCACACAAC TGGTCAATAT CAATAGCGAC GACTGGGACG AGTCGCTACT GGCGTGGAGC
GGGGCCAACA AAGCCTGGTT TGGTCGCCCG ACGCATCCGG GTAATGTCAT TGGGCACTGG
ATTTGCCCGC AGGGTAATGA GATTCCGGTG GTCGCCGTTG CCAGCCATGA TACCGCCAGC
GCGGTTATCG CCTCGCCGTT AAACGGTTCA CGCGCTGCTT ATCTCTCTTC TGGCACCTGG
TCATTGATGG GCTTCGAAAG CCAGACGCCA TTTACCAATG ACACGGCGCT GGCAGCCAAC
ATAACCAATG AAGGCGGGGC GGAAGGTCGC TATCGGGTGC TGAAAAATAT TATGGGCTTA
TGGCTGCTTC AGCGAGTGCT TCAGGAGCGG CAAATCAACG ATCTCCCGGC GCACTTTCTC
TCCCACTGCG AGCGCATTAA AGCCACCAAC GGTAAAGATC GGGTGATCAT GCACTGCCAC
GCCACCAACC TGATCGCCCT CACCTATGTA CTGGAAAACG ACACCGCGGT CTTTACTCGC
CAACTGTGGG AAGGCAGCAC CGAGTGTCTG GTGGTATTCC CGGATGGCGT TGGCATTCTG
CCGTGGATGG TGCCCGGCAC GGACGAAATC GGCCAGGCGA CCGCACAAGA GATGCAAAAA
CATTCGCTGG TGTTGTGGCC CTTCCACGGC GTCTTCGGCA GCGGGTCGAC GTTGGATGAA
ACATTCGGTT TAATCGACAC CGCAGAAAAA TCAGCACAAG TATTAGTGAA GGTTTATTCG
ATGGGCGGCA TGAAACAGAC CATCAGCCGT GAAGAGTTGA TAGCGCTCGG CAAGCGCTTC
GGCGTTACAC CACTAGCCAG TGCGCTGGCG CTGTAA
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| Protein sequence | MTFRNCVAVD LGASSGRVML ARYERECRSL TLREIHHFNN GLHSQNGYVT WNVDSLESAI
RLGLNKVCEE GIRIDSIGID TWGVDFVLLD QQGQRVGLPV AYRDSRSNGL MAQAQQQLGK
RDIYQRSGIQ FLPFNTLYQL RALTEQQPEL IPHIAHALLM PDYFSYRLTG KMNWEYTNAT
TTQLVNINSD DWDESLLAWS GANKAWFGRP THPGNVIGHW ICPQGNEIPV VAVASHDTAS
AVIASPLNGS RAAYLSSGTW SLMGFESQTP FTNDTALAAN ITNEGGAEGR YRVLKNIMGL
WLLQRVLQER QINDLPAHFL SHCERIKATN GKDRVIMHCH ATNLIALTYV LENDTAVFTR
QLWEGSTECL VVFPDGVGIL PWMVPGTDEI GQATAQEMQK HSLVLWPFHG VFGSGSTLDE
TFGLIDTAEK SAQVLVKVYS MGGMKQTISR EELIALGKRF GVTPLASALA L
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