Gene SbBS512_E4379 details

Gene Information

• Locus tag: SbBS512_E4379
• ID: 6269360
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 4089593
• End bp: 4090036
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641728180
• Product: transposase
• Protein accession: YP_001882593
• Protein GI: 187733288
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCATGTT TTACGGCAAT GAGAGCAGAG ATAGCGCTGA TGTCCGGCAG TGCTTTTGCC 
GTTACGCACC ACGCCTTCAG TAGCGGAGCA GGAAGGACAT CTGATGGAAA TGGAAGCCTC 
GCAAGCACCT TAAAATCACC ATCATACACT AAATCAGTAA GTTGGCAGCA TTACCAAAAC 
CTGATTGTTA ATCGCCTCGC CATCCCACAT TGCTGGAGCG AACAGGAGCG ACGTTTTCGT 
GGATTTTTTA TTACCCTCGC CCAACCAGTT GAGGTGAATA ACGAAGTCAT TAACCATGTC 
TTGATCGCCT GCGCCGCCGC CGATGCGCGT CATGAGCTAA AAATATTTAG CTATCTGGCA 
AGCATATTGT GTCAGCATCC GGCAGAGGTT ATTGCCGGGT TAACAGGATA TGAGGCATTT 
ATGGAGTTAC TTCACAAGGG GTGA 

 

Protein sequence

MPCFTAMRAE IALMSGSAFA VTHHAFSSGA GRTSDGNGSL ASTLKSPSYT KSVSWQHYQN 
LIVNRLAIPH CWSEQERRFR GFFITLAQPV EVNNEVINHV LIACAAADAR HELKIFSYLA 
SILCQHPAEV IAGLTGYEAF MELLHKG