| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3982 |
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| Symbol | |
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| ID | 6269521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3713573 |
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| End bp | 3714097 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641727830 |
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| Product | protein LpfE |
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| Protein accession | YP_001882263 |
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| Protein GI | 187734014 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.567222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAA CAATACTTGC GTTATGCCTG CTGCCTCTTT CCTTTTCGTC ATTCGCGGCA
ACCACGGATT TAGGGCCGAA AGGAACATTG AAATTCACCC TTAAAATCAG CCAGGGTGCT
TGCGAACTGG TGAAAGACAG CGTTGAGGTT GACATGGGCA CCGCGGTTCT CAAAAAGCCG
GTAAGAATCG GAACGGAAAT TAATCCCACT CCTTTTTCCA TCGGCCTGAA AAACTGTAGC
GAAGTGGTCA GAGCCTACGT GACTATGGAC GGTACACCCA ATGCAGACGA CTCAAATCTT
TTTGCGCTGG ATGCGGGTGG CGCTACAGGC GTTGGGCTGA AAATCAAAAC CGCTGCTGGA
GTACAACAGT TCCCGGAAAA TACAACGCCG ACACCGGTTG AGTTTGCAAT TAACGGTGAT
GGCGCACATC AACTGAACTA TATCGCCAGC TACGTGCCTA TTCGCGCCGA TGCAACTATT
GGTCGCGCAG ATGCAACGGT CGACTTTACT GTACAGTACG AATAA
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| Protein sequence | MKRTILALCL LPLSFSSFAA TTDLGPKGTL KFTLKISQGA CELVKDSVEV DMGTAVLKKP
VRIGTEINPT PFSIGLKNCS EVVRAYVTMD GTPNADDSNL FALDAGGATG VGLKIKTAAG
VQQFPENTTP TPVEFAINGD GAHQLNYIAS YVPIRADATI GRADATVDFT VQYE
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