| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3841 |
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| Symbol | nikE |
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| ID | 6271140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3567356 |
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| End bp | 3568162 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641727697 |
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| Product | nickel transporter ATP-binding protein NikE |
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| Protein accession | YP_001882132 |
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| Protein GI | 187732557 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR02769] nickel import ATP-binding protein NikE |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTAC TTAACGTCAG CGGCCTTTCC CATCACTATG CCCACGGTGG ATTTAGCGGA
AAACATCAAC ATCAGGCGGT GCTGAATAAC GTTTCCCTGA CCCTGAAAAG CGGCGAAACC
GTCGCCCTGC TGGGACGCAG CGGCTGCGGA AAAAGCACCC TCGCGCGGCT GCTGGTAGGC
TTAGAGTCTC CCTCACAAGG GAATATTAGC TGGCGCGGCG AATCGCTGGC GAAACTTAAT
CGCGCCCAAC GTAAAGCCTT CCGCCGTGAT ATTCAGATGG TGTTTCAGGA CTCCATCAGT
GCCGTGAATC CGCGCAAAAC CGTGCGCGAG ATCCTGCGTG AACCGATGCG CCACCTGCTA
TCACTGAAAA AATCCGAACA ACTGGCGCGC GCCAGCGAAA TGCTGAAGGC GGTCGATCTC
GATGACAGCG TTCTCGACAA ACGCCCACCG CAGTTAAGCG GCGGCCAGCT CCAGCGCGTC
TGCCTAGCAC GCGCGCTGGC GGTCGAACCG AAATTGCTGA TTCTGGATGA AACCGTTTCT
AACCTTGATC TCGTGTTACA GGCGGGCGTC ATTCGCCTGC TGAAAAAGCT GCAACAACAG
TTTGGCACCG CCTGCCTGTT CATCACCCAC GACTTACGTC TTGTAGAACG CTTTTGCCAG
CGGGTGATGG TGATGGACAA CGGACAAATC GTCGAAACCC AGGCGGTGGG AGATAAATTA
ACCTTTTCCT CTGACGCCGG ACGTGTGCTA CAAAACGCGG TATTACCCGC ATTCCCCGTG
CGCCGTCGCG CCACAGAAAA GGTTTAA
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| Protein sequence | MTLLNVSGLS HHYAHGGFSG KHQHQAVLNN VSLTLKSGET VALLGRSGCG KSTLARLLVG
LESPSQGNIS WRGESLAKLN RAQRKAFRRD IQMVFQDSIS AVNPRKTVRE ILREPMRHLL
SLKKSEQLAR ASEMLKAVDL DDSVLDKRPP QLSGGQLQRV CLARALAVEP KLLILDETVS
NLDLVLQAGV IRLLKKLQQQ FGTACLFITH DLRLVERFCQ RVMVMDNGQI VETQAVGDKL
TFSSDAGRVL QNAVLPAFPV RRRATEKV
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