Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3753 |
Symbol | |
ID | 6273177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3477778 |
End bp | 3478863 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641727616 |
Product | hypothetical protein |
Protein accession | YP_001882051 |
Protein GI | 187730904 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACGT TTCCTCTGCA AAGCCTGACG CTTATTGAGG CGCAGCAAAA GCAGTTTGCG CTGGTGGACA CGATTTGCCG TCACTTTCCC GGCGCGGAGT TTCTAACCAG CGGTGATTTG GGCTTAACGC CGGGGCTGAA TCAACCGCGT ATTACCCAAC GGGTGGAGCA GGTGCTGGCT GATGCATTTC ACGCACAGGC TGCGGCGCTG GTGCAGGGCG CGGGGACTGG CGCGATTCGC GCCGGGCTGG CAGCTTTGCT CAAACCGGGG CAGCGTCTTC TGGTGCATGA CGCGCCTGTT TACCCGACGA CACGGGTTAT TGTTGAGCAG ATGGGGCTGA CGCTTATTAC TGTTGATTTC AATGACCTGT CGGCACTGAA GCAGGTCGTC GACGAGCAAC AACCGGATGC GGCGCTGGTG CAGCATACGC GCCAGCAGCC GCAGGACAGC TACGTGCTGG CAGATGTGCT GGCAACGTTG CGCGCGGCAG GTGTTCCAGC GTTAACCGAT GACAACTATG CGGTGATGAA GGTGGCGCGA ATCGGCTGTG AATGCGGCGC GAATGTCTCG ACATTTTCCT GCTTCAAGCT ATTTGGGCCA GAGGGTGTTG GTGCAGTGGT CGGCGATGCT GATGTTATCA ACCGTATTCG CGCCACGCTT TACTCCGGCG GTAGCCAGAT CCAGGGCGCA CAGGCGCTGG AAGTATTGCG TTGTCTGGTG TTTGCGCCAG TGATGCACGC GGTGCAGGCA GGGGTATCTG AACGGTTGCT GGCTTTGCTT AACGGTGGTG CGGTGCCGGA AGTGAAAAGC GCGGTGATTG CTAATGCGCA GTCGAAGGTG TTGATTGTCG AGTTTCATCA GCCGATTGCC GCCAGAGTGC TGGAAGAGGC GCAAAAGCGC GGTGCCTTGC CTTACCCGGT GGGTGCAGAG TCGAAATATG AAATCCCGCC GCTCTTTTAT CGCCTTTCCG GAACGTTTCG CCAGGCGAAT CCACAATCAG AACATTGTGC GATTCGCATT AACCCGAATC GCAGCGGTGA AGAGACGGTG CTGCGGATTT TGCGTGAGAG TATTGCCAGT ATTTAA
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Protein sequence | MKTFPLQSLT LIEAQQKQFA LVDTICRHFP GAEFLTSGDL GLTPGLNQPR ITQRVEQVLA DAFHAQAAAL VQGAGTGAIR AGLAALLKPG QRLLVHDAPV YPTTRVIVEQ MGLTLITVDF NDLSALKQVV DEQQPDAALV QHTRQQPQDS YVLADVLATL RAAGVPALTD DNYAVMKVAR IGCECGANVS TFSCFKLFGP EGVGAVVGDA DVINRIRATL YSGGSQIQGA QALEVLRCLV FAPVMHAVQA GVSERLLALL NGGAVPEVKS AVIANAQSKV LIVEFHQPIA ARVLEEAQKR GALPYPVGAE SKYEIPPLFY RLSGTFRQAN PQSEHCAIRI NPNRSGEETV LRILRESIAS I
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