Gene SbBS512_E3753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3753 
Symbol 
ID6273177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3477778 
End bp3478863 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content57% 
IMG OID641727616 
Producthypothetical protein 
Protein accessionYP_001882051 
Protein GI187730904 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACGT TTCCTCTGCA AAGCCTGACG CTTATTGAGG CGCAGCAAAA GCAGTTTGCG 
CTGGTGGACA CGATTTGCCG TCACTTTCCC GGCGCGGAGT TTCTAACCAG CGGTGATTTG
GGCTTAACGC CGGGGCTGAA TCAACCGCGT ATTACCCAAC GGGTGGAGCA GGTGCTGGCT
GATGCATTTC ACGCACAGGC TGCGGCGCTG GTGCAGGGCG CGGGGACTGG CGCGATTCGC
GCCGGGCTGG CAGCTTTGCT CAAACCGGGG CAGCGTCTTC TGGTGCATGA CGCGCCTGTT
TACCCGACGA CACGGGTTAT TGTTGAGCAG ATGGGGCTGA CGCTTATTAC TGTTGATTTC
AATGACCTGT CGGCACTGAA GCAGGTCGTC GACGAGCAAC AACCGGATGC GGCGCTGGTG
CAGCATACGC GCCAGCAGCC GCAGGACAGC TACGTGCTGG CAGATGTGCT GGCAACGTTG
CGCGCGGCAG GTGTTCCAGC GTTAACCGAT GACAACTATG CGGTGATGAA GGTGGCGCGA
ATCGGCTGTG AATGCGGCGC GAATGTCTCG ACATTTTCCT GCTTCAAGCT ATTTGGGCCA
GAGGGTGTTG GTGCAGTGGT CGGCGATGCT GATGTTATCA ACCGTATTCG CGCCACGCTT
TACTCCGGCG GTAGCCAGAT CCAGGGCGCA CAGGCGCTGG AAGTATTGCG TTGTCTGGTG
TTTGCGCCAG TGATGCACGC GGTGCAGGCA GGGGTATCTG AACGGTTGCT GGCTTTGCTT
AACGGTGGTG CGGTGCCGGA AGTGAAAAGC GCGGTGATTG CTAATGCGCA GTCGAAGGTG
TTGATTGTCG AGTTTCATCA GCCGATTGCC GCCAGAGTGC TGGAAGAGGC GCAAAAGCGC
GGTGCCTTGC CTTACCCGGT GGGTGCAGAG TCGAAATATG AAATCCCGCC GCTCTTTTAT
CGCCTTTCCG GAACGTTTCG CCAGGCGAAT CCACAATCAG AACATTGTGC GATTCGCATT
AACCCGAATC GCAGCGGTGA AGAGACGGTG CTGCGGATTT TGCGTGAGAG TATTGCCAGT
ATTTAA
 
Protein sequence
MKTFPLQSLT LIEAQQKQFA LVDTICRHFP GAEFLTSGDL GLTPGLNQPR ITQRVEQVLA 
DAFHAQAAAL VQGAGTGAIR AGLAALLKPG QRLLVHDAPV YPTTRVIVEQ MGLTLITVDF
NDLSALKQVV DEQQPDAALV QHTRQQPQDS YVLADVLATL RAAGVPALTD DNYAVMKVAR
IGCECGANVS TFSCFKLFGP EGVGAVVGDA DVINRIRATL YSGGSQIQGA QALEVLRCLV
FAPVMHAVQA GVSERLLALL NGGAVPEVKS AVIANAQSKV LIVEFHQPIA ARVLEEAQKR
GALPYPVGAE SKYEIPPLFY RLSGTFRQAN PQSEHCAIRI NPNRSGEETV LRILRESIAS
I