| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2592 |
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| Symbol | |
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| ID | 6269209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2393355 |
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| End bp | 2395166 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641726568 |
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| Product | invasion plasmid antigen |
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| Protein accession | YP_001881048 |
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| Protein GI | 187734119 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAGAA ATATTTCATC CTGTTTATTT CCACATATCA GCACAATTAC ATCCCCCAAC
CATTATTTGT CCGAATGGGA TGATTGGGAG AAACAGGGGT TACCGGAAGA ACAGCGTACT
GAGGCGGTAA GAAGACTTCG TGCATGTCTT ACCTCTAAGG GGCATAAACT GGACCTGCGA
GCCTTGGCGC TTTCCTCGTT ACCTGTACTC CCTGCTTGCA TTAAAAAGCT TGATGTGAGC
TGTAATAAAT TAACCATCCT TACTGATCTA CCTGAAAATA TTAAAGAACT TATTGCAAGA
GATAATTTCT TAACACATAT ATCTGCATTA CCACATTATC TAATAACTTT GGATGTGTCC
GAAAATCAAT TAGAGAATCT GCCGTTATTA CCAGACACCA TCAAATCACT AAGCGCAGAG
TATAATAGGT TATCCACACT GCCTTCATTA CCCTTGAATT TAAAAAAACT TGAGGTTAGG
AACAACGAAC TGCAAACTCT TCCATCTCTG CCTTCTAATC TTAAGATACT TAAGGTTGCG
CACAACCATC TTACTGAACT GCCCCCTTTA CCTAGGAGAC TGCAACTTCT TTTTGCATAT
AGCAATAGAT TAAGCAACTT ACCAAACATC CAAGAAAATA TTATCATGAG AAGATTTTTT
TATTTTGAAA ACAACCAAAT AACTACAATC CCGACAAATC TTTTTCGTTT AGATCCTCAT
ATAACTATTG AGATTGCAAA TAACCCCTTA TCAGATCAAA CTCTGCTATT CTTAATACAG
CAAACTTCGG TTCCAAATTT TAACGGGCCT CAGTTTCGTA TTTCCCTGTC AGACCAAAAC
AGACTGTTTT TACGCCAGAT GTTGCCGCAA AATTTACATT CGCGCCATAT CAGAGTCATC
ACTGAAGGGG GGCAGAACTT TCAGATCCCC CCTCTTCCCG AAACTGTGGC AGCCTGGTTT
CCTGAAGCAG ATCGTCGGGA GGTTTCTACA CAATGGACTT CTTTTTCCAC CGAGGAGAAT
TCCCGGGCAT TCTCCGCGTT CCTTGACCGC CTTTCCGATA CCGTCTCTGC ACGCAATACC
TCCGGATTCC GTGAACAGGT CGCTGCATGG CTGGAAAAAC TCAGTGCCTC TGCGGAGCTT
CGACAGCAGT CTTTCACTGT TGCTGCTGAT GCCACTGAGA GCTGTGAGGA CCGTGTCGCG
CTCACATGGA ACAATCTCCG GAAAACCCTC CTGGTCCATC AGGCATCAGA AGGCCTTTTC
GATAATGATA CCGGCGCTCT GCTCTCCCTG GGCAGGGAAA TGTTCCGCCT CGAAATTCTG
GAGGACATTG CCCGGGATAA AGTCAGAACT CTCCATTTTG TGGACGAGAT AGAAGTCTAC
CTGGCCTTCC AGACCATGCT CGCAGAGAAA CTTCAGCTCT CCACTGCCGT GAAGGAAATG
CGTTTCTATG GCGTGTCGGG AGTGACAGCA AATGACCTCC GCACTGCCGA AGCCATGGTC
AGAAGCCGTG AAGAGAATGA ATTTACGGAC TGGTTCTCCC TCTGGGGACC ATGGCATGCT
GTACTGAAGC GTACGGAAGC TGACCGCTGG GCGCTGGCAG AAGAGCAGAA ATATGAGATG
CTGGAGAATG AGTACCCTCA GAGGGTGGCT GACCGGCTGA AAGCATCAGG TCTGAGCGGT
GATGCGGATG CGGAGAGGGA AGCCGGTGCA CAGGTGATGC GTGAGACTGA ACAGCAGATT
TACCGTCAGC TGACTGACGA GGTACTGGCC CTGCGATTGC CTGAAAACGG CTCACAACTG
CACCATTCAT AA
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| Protein sequence | MLRNISSCLF PHISTITSPN HYLSEWDDWE KQGLPEEQRT EAVRRLRACL TSKGHKLDLR
ALALSSLPVL PACIKKLDVS CNKLTILTDL PENIKELIAR DNFLTHISAL PHYLITLDVS
ENQLENLPLL PDTIKSLSAE YNRLSTLPSL PLNLKKLEVR NNELQTLPSL PSNLKILKVA
HNHLTELPPL PRRLQLLFAY SNRLSNLPNI QENIIMRRFF YFENNQITTI PTNLFRLDPH
ITIEIANNPL SDQTLLFLIQ QTSVPNFNGP QFRISLSDQN RLFLRQMLPQ NLHSRHIRVI
TEGGQNFQIP PLPETVAAWF PEADRREVST QWTSFSTEEN SRAFSAFLDR LSDTVSARNT
SGFREQVAAW LEKLSASAEL RQQSFTVAAD ATESCEDRVA LTWNNLRKTL LVHQASEGLF
DNDTGALLSL GREMFRLEIL EDIARDKVRT LHFVDEIEVY LAFQTMLAEK LQLSTAVKEM
RFYGVSGVTA NDLRTAEAMV RSREENEFTD WFSLWGPWHA VLKRTEADRW ALAEEQKYEM
LENEYPQRVA DRLKASGLSG DADAEREAGA QVMRETEQQI YRQLTDEVLA LRLPENGSQL
HHS
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