Gene SbBS512_E2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2556 
Symbol 
ID6269628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp2358945 
End bp2359616 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content54% 
IMG OID641726538 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_001881018 
Protein GI187730699 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATC CTGCCATGAC AATCAAGGGT GAACAGGCGA AAAAACAGCT GATTGCTGCC 
GCACTGGCGC AGTTTGGTGA ATATGGAATG AACACCACCA CTCGCGAGAT AGCCGCCCAG 
GCCGGGCAGA ATATCGCTGC CATCACCTAC TACTTCGGTT CGAAAGAAGA TTTGTACCTC 
GCCTGCGCCC AGTGGATTGC CGATTTTATT GGCGAGCAGT TCCGTCCGCA TGCCGAGGAA 
GCCGAACGCT TGTTCGCGCA ACCACAGCCT GATCGGGCTG CCATCCGTGA ACTGATCCTT 
CGCGCCTGCA GGAACATGAT TAAGCTGCTC ACCCAGGATG ACACCGTCAA CCTCAGCAAG 
TTTATCTCCC GTGAGCAGCT CTCTCCCACG GCAGCCTACC ACCTGGTGCA CGAACAGGTG 
ATTAGTCCGC TACACAGCCA CCTGACACGC CTGATTGCCG CCTGGACCGG CTGCGACGCC 
AATGACACCC GCATGATCCT TCATACCCAT GCGTTGATTG GTGAGATTCT GGCGTTCCGT 
CTTGGCAAAG AAACAATTCT GTTACGTACC GGCTGGACCG CGTTCGATGA AGAAAAGACC 
GAACTGATCA ACCAGACGGT GACCTGTCAT ATCGACCTGA TTTTGCAAGG ATTATCGCAA 
AGGAGTTTGT AG
 
Protein sequence
MNNPAMTIKG EQAKKQLIAA ALAQFGEYGM NTTTREIAAQ AGQNIAAITY YFGSKEDLYL 
ACAQWIADFI GEQFRPHAEE AERLFAQPQP DRAAIRELIL RACRNMIKLL TQDDTVNLSK 
FISREQLSPT AAYHLVHEQV ISPLHSHLTR LIAAWTGCDA NDTRMILHTH ALIGEILAFR 
LGKETILLRT GWTAFDEEKT ELINQTVTCH IDLILQGLSQ RSL