Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2217 |
Symbol | thiK |
ID | 6268749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2017631 |
End bp | 2018455 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641726238 |
Product | thiamine kinase |
Protein accession | YP_001880723 |
Protein GI | 187734148 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | [TIGR02721] thiamine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.305873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGTTTC GCAGTAATAA TCCCATCACG CGCGACGAAT TGCTGTCGCG CTTTTTCCCG CAGTTTCATC CCGTCACGAC GTTTAATAGT GGGCTTAGTG GCGGTAGTTT TCTCATTGAA CATCAGGGCC AGCGTTTTGT TGTGCGTCAG CCGCACGATC CTGATGCGCC GCAGTCCGCG TTCTTGCGCC AGTATCGGGC TTTATCACAA CTACCCGCAA GCATTGCACC GAAGCCGCAT TTATATCTCC GTGACTGGAT GGTAGTCGAC TATCTGCCCG GCGCGGTAAA AACGTATTTG CCGGATACCA ACGAACTGGC AGGCTTGCTG TATTATCTAC ATCAACAACC ACGTTTTGGC TGGCGAATAA TGCTGTTGCC GTTACTGGAA CTGTACTGGC AGCAAAGCGA TCCGGCGCGG CGGACTGTGG GTTGGCTGCG AATGTTAAAA CGTCTGCGCA AAGCGCGGGA ACCACGACCT TTACGCTTAA GTCCATTGCA TATGGATGTC CACGCCGGAA ATTTAGTGCA TAGCGCATCA GGGTTAAAAC TCATCGACTG GGAGTATGCC GGAGATGGTG ATACCGCGCT GGAACTGGCG GCGGTGTGGG TGGAAAATAC TGAACAGCAC CGGCAATTGG TCAATGACTA TGCCACTCGC GCGAAGATTT ATCCGGCGCA ATTATGGCGT CAGGTCAGGC GATGGTTTCC CTGGCTGCTG ATGCTCAAAG CAGGGTGGTT TGAGTACCGC TGGCGACAAA CCGGCGATCA ACAATTTATC AGGCTGGCCG ATGACACCTG GCGGCAGCTA TTAATAAAAC AATAA
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Protein sequence | MPFRSNNPIT RDELLSRFFP QFHPVTTFNS GLSGGSFLIE HQGQRFVVRQ PHDPDAPQSA FLRQYRALSQ LPASIAPKPH LYLRDWMVVD YLPGAVKTYL PDTNELAGLL YYLHQQPRFG WRIMLLPLLE LYWQQSDPAR RTVGWLRMLK RLRKAREPRP LRLSPLHMDV HAGNLVHSAS GLKLIDWEYA GDGDTALELA AVWVENTEQH RQLVNDYATR AKIYPAQLWR QVRRWFPWLL MLKAGWFEYR WRQTGDQQFI RLADDTWRQL LIKQ
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