| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2038 |
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| Symbol | |
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| ID | 6272424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1857815 |
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| End bp | 1858411 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641726082 |
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| Product | ggdef domain protein |
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| Protein accession | YP_001880576 |
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| Protein GI | 187732881 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTCT ATTTCAGGAA GGAGTGTCCG TTAAACTCAG GCTACCTCAG CATTCGTGTC
TCGTTATCCA TTGATATTCT TTACTTTATC ACGTCTTCGT GGAAAAGCGT TCTGTTCTGG
ATTTTGACGG CGTTAATTTT GCTGAATATG GTCCGGATGC ACTTCCGTTT ATACCAAAAT
GTGTCGCGAG AAAATATTAG TGATGCGATG ACTGGACTGT ATAATCACAA AATTTTAACC
CCTGAACTGG AGCAGCGGTT GCAGAAACTG GTGCAATCCG GTTCTTCGGT GATGTTTATT
GCAATTGACA TGGACAAGTT AAAGCAAATA AATGACACCC TCGGTCATCA GGAGGGGGAT
TTAGCGATTA CGTTATTAGC TCAGGCGATT AAACAATCGA TTCGTAAAAG TGATTATGCC
ATCCGACTCG GTGGCGATGA ATTCTGCATC ATTCTTGTCG ATTCGACGCC GCAAATTGCA
GCACAACTGC CTGAACGTAT CGAAAAACGT CTGCAACATA TCGCGCCGCA GAAAGAAATC
GGCTTCTCTT CCGGTATTTA CGCGATGAAA GAAAACGATA CGTTTGAGGT AGCCTGA
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| Protein sequence | MPFYFRKECP LNSGYLSIRV SLSIDILYFI TSSWKSVLFW ILTALILLNM VRMHFRLYQN
VSRENISDAM TGLYNHKILT PELEQRLQKL VQSGSSVMFI AIDMDKLKQI NDTLGHQEGD
LAITLLAQAI KQSIRKSDYA IRLGGDEFCI ILVDSTPQIA AQLPERIEKR LQHIAPQKEI
GFSSGIYAMK ENDTFEVA
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