Gene SbBS512_E1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1897 
Symbolpct 
ID6269604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1737223 
End bp1738818 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content47% 
IMG OID641725960 
Productpropionate CoA-transferase 
Protein accessionYP_001880454 
Protein GI187733616 
COG category[I] Lipid transport and metabolism 
COG ID[COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.951112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTG TAAAACCACC TCGTATTAAT GGACGAGTGC CGGTCCTGTC GGCACAGGAA 
GCGGTGAATT ATATTCCCGA CGAAGCAACA CTTTGTGTGT TAGGCGCTGG CGGCGGTATT
CTGGAAGCCA CGACGTTAAT TACTGCTCTT GCTGATAAAT ATAAACAGAC TCAAACGCCA
CGTAATTTAT CGATTATTAG TCCAACAGGG CTTGGCGATC GCGCCGACCG TGGTATTAGT
CCGCTGGCGC AAGAAGGTCT GGTGAAATGG GCATTATGTG GTCACTGGGG ACAATCGCCG
CGTATTTCTG AACTCGCAGA ACAAAATAAA ATTATTGCTT ATAACTATCC ACAAGGTGTA
CTTACACAAA CCTTACGCGC CGCCGCAGCC CACCAGCCTG GTATTATTAG TGATATTGGC
ATCGGGACAT TTGTCGATCC ACGCCAGCAA GGCGGCAAAC TGAATGAAGT CACGAAAGAA
GACCTGATTA AACTGGTCGA GTTTGATAAC AAAGAATATC TCTATTACAA AGCGATTGCG
CCAGATATCG CCTTCATTCG CGCTACCACC TGCGACAGTG AAGGCTACGC CACTTTTGAA
GATGAGGTGA TGTATCTCGA CGCATTGGTT ATTGCCCAGG CGGTGCACAA TAACGGCGGT
ATTGTGATGA TGCAGGTGCA GAAAATGGTT AAGAAAGCCA CGCTGCATCC TAAATCTGTC
CGTATTCCGG GTTATCTGGT GGATATTGTG GTGGTCGATC CGGATCAAAG CCAACTGTAT
GGCGGTGCGC CGGTTAACCG CTTTATTTCT GGTGACTTCA CTCTTGATGA CAGCACCAAA
CTTAGCCTGC CCCTAAACCA ACGTAAATTA GTTGCGAGGC GTGCATTATT CGAAATGCGT
AAAGGCGCGG TGGGGAATGT CGGCGTCGAT ATTGCTGACG GTATTGGCCT GGTCGCCCGG
GAAGAAGGTT GTGCTGATGA CTTTATTCTG ACGGTAGAAA CAGGTCCGAT TGGCGGAATT
ACTTCACAGG GGATCGCCTT TGGCGCGAAC GTGAATACCC GTGCCATTCT GGATATGACG
TCCCAGTTTG ATTTTTATCA CGGTGGTGGT CTGGATGTTT GTTATTTGAG TTTTGCTGAA
GTCGACCAGC ACGGTAACGT CGGCGTGCAT AAATTCAATG GCAAAATCAT GGGTACCGGT
GGATTTATTG ATATCAGTGC CACCTCGAAG AAAATTATTT TCTGCGGCAC GTTAACCGCG
GGCAGTTTAA AAACAGAAAT TGCCGATGGC AAATTAAATA TCGTCCAGGA AGGACGGGTG
AAGAAATTTA TTCAGGAACT ACCGGAAATT ACTTTTAGCG GAAAAATCGC GCTCGAACGG
GAACTGGATG TTCGTTACAT CACCGAACGT GCTGTATTCA CGCTGAAAGA AGACGGCCTG
CATTTAATCG AAATCGCCCC TGGCGTCGAT TTACAAAAAG ATATTCTCGA CAAAATGGAT
TTCACCCCAG TGATTTCGCC AGAACTCAAA CTGATGGACG AAAGATTATT TATCGATGCG
GCGATGGGTT TTGTCCTGCC TGAAGCGGCT CATTAA
 
Protein sequence
MKPVKPPRIN GRVPVLSAQE AVNYIPDEAT LCVLGAGGGI LEATTLITAL ADKYKQTQTP 
RNLSIISPTG LGDRADRGIS PLAQEGLVKW ALCGHWGQSP RISELAEQNK IIAYNYPQGV
LTQTLRAAAA HQPGIISDIG IGTFVDPRQQ GGKLNEVTKE DLIKLVEFDN KEYLYYKAIA
PDIAFIRATT CDSEGYATFE DEVMYLDALV IAQAVHNNGG IVMMQVQKMV KKATLHPKSV
RIPGYLVDIV VVDPDQSQLY GGAPVNRFIS GDFTLDDSTK LSLPLNQRKL VARRALFEMR
KGAVGNVGVD IADGIGLVAR EEGCADDFIL TVETGPIGGI TSQGIAFGAN VNTRAILDMT
SQFDFYHGGG LDVCYLSFAE VDQHGNVGVH KFNGKIMGTG GFIDISATSK KIIFCGTLTA
GSLKTEIADG KLNIVQEGRV KKFIQELPEI TFSGKIALER ELDVRYITER AVFTLKEDGL
HLIEIAPGVD LQKDILDKMD FTPVISPELK LMDERLFIDA AMGFVLPEAA H