Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1897 |
Symbol | pct |
ID | 6269604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1737223 |
End bp | 1738818 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641725960 |
Product | propionate CoA-transferase |
Protein accession | YP_001880454 |
Protein GI | 187733616 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.951112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCTG TAAAACCACC TCGTATTAAT GGACGAGTGC CGGTCCTGTC GGCACAGGAA GCGGTGAATT ATATTCCCGA CGAAGCAACA CTTTGTGTGT TAGGCGCTGG CGGCGGTATT CTGGAAGCCA CGACGTTAAT TACTGCTCTT GCTGATAAAT ATAAACAGAC TCAAACGCCA CGTAATTTAT CGATTATTAG TCCAACAGGG CTTGGCGATC GCGCCGACCG TGGTATTAGT CCGCTGGCGC AAGAAGGTCT GGTGAAATGG GCATTATGTG GTCACTGGGG ACAATCGCCG CGTATTTCTG AACTCGCAGA ACAAAATAAA ATTATTGCTT ATAACTATCC ACAAGGTGTA CTTACACAAA CCTTACGCGC CGCCGCAGCC CACCAGCCTG GTATTATTAG TGATATTGGC ATCGGGACAT TTGTCGATCC ACGCCAGCAA GGCGGCAAAC TGAATGAAGT CACGAAAGAA GACCTGATTA AACTGGTCGA GTTTGATAAC AAAGAATATC TCTATTACAA AGCGATTGCG CCAGATATCG CCTTCATTCG CGCTACCACC TGCGACAGTG AAGGCTACGC CACTTTTGAA GATGAGGTGA TGTATCTCGA CGCATTGGTT ATTGCCCAGG CGGTGCACAA TAACGGCGGT ATTGTGATGA TGCAGGTGCA GAAAATGGTT AAGAAAGCCA CGCTGCATCC TAAATCTGTC CGTATTCCGG GTTATCTGGT GGATATTGTG GTGGTCGATC CGGATCAAAG CCAACTGTAT GGCGGTGCGC CGGTTAACCG CTTTATTTCT GGTGACTTCA CTCTTGATGA CAGCACCAAA CTTAGCCTGC CCCTAAACCA ACGTAAATTA GTTGCGAGGC GTGCATTATT CGAAATGCGT AAAGGCGCGG TGGGGAATGT CGGCGTCGAT ATTGCTGACG GTATTGGCCT GGTCGCCCGG GAAGAAGGTT GTGCTGATGA CTTTATTCTG ACGGTAGAAA CAGGTCCGAT TGGCGGAATT ACTTCACAGG GGATCGCCTT TGGCGCGAAC GTGAATACCC GTGCCATTCT GGATATGACG TCCCAGTTTG ATTTTTATCA CGGTGGTGGT CTGGATGTTT GTTATTTGAG TTTTGCTGAA GTCGACCAGC ACGGTAACGT CGGCGTGCAT AAATTCAATG GCAAAATCAT GGGTACCGGT GGATTTATTG ATATCAGTGC CACCTCGAAG AAAATTATTT TCTGCGGCAC GTTAACCGCG GGCAGTTTAA AAACAGAAAT TGCCGATGGC AAATTAAATA TCGTCCAGGA AGGACGGGTG AAGAAATTTA TTCAGGAACT ACCGGAAATT ACTTTTAGCG GAAAAATCGC GCTCGAACGG GAACTGGATG TTCGTTACAT CACCGAACGT GCTGTATTCA CGCTGAAAGA AGACGGCCTG CATTTAATCG AAATCGCCCC TGGCGTCGAT TTACAAAAAG ATATTCTCGA CAAAATGGAT TTCACCCCAG TGATTTCGCC AGAACTCAAA CTGATGGACG AAAGATTATT TATCGATGCG GCGATGGGTT TTGTCCTGCC TGAAGCGGCT CATTAA
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Protein sequence | MKPVKPPRIN GRVPVLSAQE AVNYIPDEAT LCVLGAGGGI LEATTLITAL ADKYKQTQTP RNLSIISPTG LGDRADRGIS PLAQEGLVKW ALCGHWGQSP RISELAEQNK IIAYNYPQGV LTQTLRAAAA HQPGIISDIG IGTFVDPRQQ GGKLNEVTKE DLIKLVEFDN KEYLYYKAIA PDIAFIRATT CDSEGYATFE DEVMYLDALV IAQAVHNNGG IVMMQVQKMV KKATLHPKSV RIPGYLVDIV VVDPDQSQLY GGAPVNRFIS GDFTLDDSTK LSLPLNQRKL VARRALFEMR KGAVGNVGVD IADGIGLVAR EEGCADDFIL TVETGPIGGI TSQGIAFGAN VNTRAILDMT SQFDFYHGGG LDVCYLSFAE VDQHGNVGVH KFNGKIMGTG GFIDISATSK KIIFCGTLTA GSLKTEIADG KLNIVQEGRV KKFIQELPEI TFSGKIALER ELDVRYITER AVFTLKEDGL HLIEIAPGVD LQKDILDKMD FTPVISPELK LMDERLFIDA AMGFVLPEAA H
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