Gene SbBS512_E1837 details

Gene Information

• Locus tag: SbBS512_E1837
• ID: 6268696
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 1679432
• End bp: 1681444
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641725903
• Product: fusaric acid resistance domain protein
• Protein accession: YP_001880401
• Protein GI: 187733044
• COG category: [S] Function unknown
• COG ID: [COG1289] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0235624
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCAT CGTCATGGTC CTTGCGCAAT TTGCCCTGGT TCAAGGCCAC GCTGGCGCAA 
TGGCGTTATG CGTTACGCAA TACCATTGCC ATGTGTCTGG CGCTGACGGT TGCCTATTAT 
TTGAATCTGG ATGAACCCTA TTGGGCGATG ACCTCGGCTG CAGTGGTTAG CTTTCCCACC 
GTTGGCGGTG TCATCAGCAA AAGCCTCGGA CGCATCGCTG GCAGTTTACT GGGAGCCATT 
GCGGCACTGC TTCTTGCCGG GCATACGCTC AATGAGCCGT GGTTTTTTCT ATTGAGCATG 
TCGGCGTGGC TTGGCTTTTG TACCTGGGCC TGTGCGCACT TCACGAATAA CGTCGCGTAT 
GCATTTCAAC TGGCGGGCTA CACGGCTGCC ATCATCGCCT TTCCGATGGT TAATATTACT 
GAGGCCAGCC AGCTGTGGGA TATCGCTCAG GCGCGCGTTT GCGAGGTGAT AGTCGGTATT 
TTGTGCGGCG GCATGATGAT GATGATCCTG CCTAGCAGTT CCGATGCTAC AGCCCTTTTA 
ACCGCATTGA AAAACATGCA CGCCCAATTA CTGGAACATG CCAGTTTACT CTGGCAGCCT 
GAAACAAACG ATGCCATTCG TGCAGCACAT GAGGGGGGGA TTGGGCAGAT ACTGACCATG 
AATTTGCTGC GTATCCAGGC TTTCTGGAGC CACTATCGTT TTCGCCAGCA AAACGCGCGC 
CTTAATGCGC TACTCCACCA GCAATTACGT ATGACCAGTG TCATCTCCAG CCTGCGACGT 
ATGTTGCTCA ACTGGCCCTC ACCGCCAGGT GCCACGCGAG AAATTCTCGA ACAATTGCTG 
ACGGCGCTCG CCAGTTCGCA AACAGATGCT TACACCGTCG CACGTATTAT CGCCCCGCTA 
CGCCCGACCA ACGTCGCCGA CTACCGGCAC GTCGCCTTCT GGCAGCGACT ACGTTATTTT 
TGCCGCCTTT ATCTGCAAAG TAGTCAGGAA TTACATCGTC TGCAAAGCGG TGTAGATGAT 
CATGCCAGAC TCGCACGGAC ATCCGCTCTG GCTCGTCATA CCGACAACGC CGAAGCTATG 
TGGAGCGGGC TGCGTACATT TTGTACGTTG ATGATGATTG GCGCATGGAG TATTGCATCG 
CAATGGGATG CCGGTGCCAA TGCATTAACG CTGGCAGCAA TTAGCTGCGT ACTCTACTCC 
GCCGTCGCAG CACCGTTTAA GTCGTTGTCA CTGCTGATGC GCACGCTGGT GTTACTTTCG 
CTATTCAGCT TTGTGGTCAA ATTTGGCCTG ATGGTCCAGA TTAGCGATCT GTGGCAATTT 
TTACTGTTTC TCTTTCCACT GCTGGCGACA ATGCAGCTTC TTAAATTGCA GATGCCCAAA 
TTTGCCGCAC TGTGGGGGCA ACTGATTGTT TTTATGGGTT CGTTTATCGC TGTCACTAAT 
CCCCCGGTGT ATGATTTTGC TGATTTTCTT AACGATAATC TGGCAAAAAT CGTTGGCGTT 
GCGCTGGCTT GGCTAGCGTT CGCCATTCTG CGTCCAGGAT CGGATGCTCG TAAAAGCCGC 
CGCCATATTC GCGCGCTGCG CCGGGATTTT GTCGATCAGC TAAGCCGCCA TCCAACACTG 
AGTGAAAGCG AATTTGAATC GCTCACTTAT CATCACGTCA GTCAGTTGAG TAACAGCCAG 
GATGCGCTGG CTCGCCGTTG GTTATTACGC TGGGGTGTAG TGCTGCTGAA CTGTTCTCAT 
GTTGTCTGGC AATTGCGCGA CTGGGAATCG AGTTCCGATC CGTTATCGCG AGTACGGGAT 
AACTGTATTT CACTGTTGCG GGGAGTGATG AGTGAGCGTG GCGTTCAGCA AAAATCACTG 
GCGGCCACAC TTGAAGAATT ACAGCGGATT TGCGACAGCC TTGCCCGTCA TCATCAACCT 
GCCGCCCGTG AGCTGGCGGC AATTGTCTGG CGGCTGTACT GCTCGCTTTC GCAACTTGAG 
CAAGCACCAC CGCAAGGTAC GCAGGCCTCT TAA 

 

Protein sequence

MNASSWSLRN LPWFKATLAQ WRYALRNTIA MCLALTVAYY LNLDEPYWAM TSAAVVSFPT 
VGGVISKSLG RIAGSLLGAI AALLLAGHTL NEPWFFLLSM SAWLGFCTWA CAHFTNNVAY 
AFQLAGYTAA IIAFPMVNIT EASQLWDIAQ ARVCEVIVGI LCGGMMMMIL PSSSDATALL 
TALKNMHAQL LEHASLLWQP ETNDAIRAAH EGGIGQILTM NLLRIQAFWS HYRFRQQNAR 
LNALLHQQLR MTSVISSLRR MLLNWPSPPG ATREILEQLL TALASSQTDA YTVARIIAPL 
RPTNVADYRH VAFWQRLRYF CRLYLQSSQE LHRLQSGVDD HARLARTSAL ARHTDNAEAM 
WSGLRTFCTL MMIGAWSIAS QWDAGANALT LAAISCVLYS AVAAPFKSLS LLMRTLVLLS 
LFSFVVKFGL MVQISDLWQF LLFLFPLLAT MQLLKLQMPK FAALWGQLIV FMGSFIAVTN 
PPVYDFADFL NDNLAKIVGV ALAWLAFAIL RPGSDARKSR RHIRALRRDF VDQLSRHPTL 
SESEFESLTY HHVSQLSNSQ DALARRWLLR WGVVLLNCSH VVWQLRDWES SSDPLSRVRD 
NCISLLRGVM SERGVQQKSL AATLEELQRI CDSLARHHQP AARELAAIVW RLYCSLSQLE 
QAPPQGTQAS