Gene SbBS512_E1765 details

Gene Information

• Locus tag: SbBS512_E1765
• ID: 6270443
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 1608894
• End bp: 1609424
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641725839
• Product: protein HipA
• Protein accession: YP_001880337
• Protein GI: 187730858
• COG category: [R] General function prediction only
• COG ID: [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAATATG AATCAGATGG AGGCCCAGGC ATCGCGCGGA TCATGGCGTT TTTGATGGGG 
TCCAGCGAGG CGCTTCGCGA TCGTTATGAT TTTATGAAAT TCCAGGTCTT CCAGTGGTTG 
ATTGGCGCAA CGGATGGCCA TGCAAAAAAC TTCTCCGTAT TTATTCAGGC TGGCGGCAGT 
TATCGACTCA CGCCATTTTA CGACATCATT TCAGCATTTC CGGTCCTTGG CGGTACGGGA 
ATACACATCA GCGATCTCAA ACTGGCAATG GGGCTTAACG CATCCAAAGG CAAAAAAATG 
GCAATCGATA AAATTTATCC GCGACATTTT TTGGCGACAG CAACGGTGCT GAGATTCCCG 
GAAGTGCAGA TGCATGAAAT CCTAAGTGAC TTTGCCAGAA TGATTCCGGC AGCACTGGAT 
AACGTGAAGA CTTCATTACC GACAGATTTT CCGGAGAACG TGGTGACGGC AGTTGAAACC 
AATGTGTTGA GGTTGCATGG ACGGTTAAGC CGAGAATACG GTAGTAAGTG A 

 

Protein sequence

MKYESDGGPG IARIMAFLMG SSEALRDRYD FMKFQVFQWL IGATDGHAKN FSVFIQAGGS 
YRLTPFYDII SAFPVLGGTG IHISDLKLAM GLNASKGKKM AIDKIYPRHF LATATVLRFP 
EVQMHEILSD FARMIPAALD NVKTSLPTDF PENVVTAVET NVLRLHGRLS REYGSK