Gene SbBS512_E1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1521 
Symbol 
ID6269279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1387983 
End bp1389188 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content51% 
IMG OID641725619 
Producthypothetical protein 
Protein accessionYP_001880125 
Protein GI187732223 
COG category[S] Function unknown 
COG ID[COG4950] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTATCGC CGATCCGTCT TTCTCCCCTT CCCGCCTTGC GTCAGGATAA CGATTTCCTT 
TACGACCAAG GAGCGCCCAT GGAACAACGC CACATCACCG GCAAAAGCCA CTGGTATCAT
GAAACGCAAT CCAGTACTGC GGAGTATGAC GTTCTGCCTC TGGTCCCGGA AGCCGCAAAG
GTCAGCGATC CCTTTCTGCT CGACGTGATC CTTGATGAAG AAACGCTGGC TCCCTTCCTT
TCATGGCTGG TCCCTGCGCG CGTTCTTGCA GTGGAATTGT TCCCTGACCA GCTTACCGTG
ACCCGTTCAC AGACCTTCAC CGCTTATGAA CGCTTGTCTA CGGCCCTGAC GGTTGCTCAG
GTTTGCGGCG TCCAGCGGTT ATGTAACTAC TATTCGGCGC GACTTACGCC GCTCCCCGGG
CCTGATTCCT CTAGGGAAAG CAATCATAGG TTGGCACAAA TCACGCAATA TGCCCGCCAA
CTGGCTAGCT CGCCTTCTAT TATCGACAAC CGATCGCGCC AGCATCTGAA TGACGTCGAT
CTTACTGCCT GGGACTGTGT GATCATTAAC CAAATCATTG GTTTTATTGG CTTTCAGGCG
CGGACCATTG CGACATTTCA GGCTTATCTC GGGCACCCGG TACGCTGGTT ACCCGGTCTG
GAAATACAAA ACTACGCCGA CGCGTCACTG TTTGCTGATG AATCAATACG CTGGCGAAGC
AGCTATGAGG TGGAAAAACT ACCTGAAGAG TACACAAAAA GTTCAACAGC AGAACTTTGC
CAACTGGCCG AAACACTCTC TCTCCACCCT ATTTCACTTT CCCTTCTCGA AAGGTTGTTA
AACAGTACAC GGGTTAATAC ACAGCCGGAT AATAAGCTTG CGGCGTTGTT ATGCGCGCGG
ATAAATGGCA GTCCTGCTTG TTTTGCCGCC TGTATGGATT CATCAAATGA ATATAAAAAA
ATCAGCCCCC TTCTGCGCAA GGGCGAAAAT GAAATTAACC AATGGGCTGA CCGTCATTCT
GTTGAGCACG CTACCGTTCA GGCGATACAA TGGCTGACCC GAGCACCCGA TCGCTTTAGC
ACCGCCCAGT TCAGCCCTTT ACTCGAACAC GAACAATCAT CAACGCAGAT TATTAATCTG
CTGGTATGGA GCGGGCTGTG TGGCTGGATA AATCGCTTAA AAATCGCGTT GGGTGAGACA
TATTAA
 
Protein sequence
MLSPIRLSPL PALRQDNDFL YDQGAPMEQR HITGKSHWYH ETQSSTAEYD VLPLVPEAAK 
VSDPFLLDVI LDEETLAPFL SWLVPARVLA VELFPDQLTV TRSQTFTAYE RLSTALTVAQ
VCGVQRLCNY YSARLTPLPG PDSSRESNHR LAQITQYARQ LASSPSIIDN RSRQHLNDVD
LTAWDCVIIN QIIGFIGFQA RTIATFQAYL GHPVRWLPGL EIQNYADASL FADESIRWRS
SYEVEKLPEE YTKSSTAELC QLAETLSLHP ISLSLLERLL NSTRVNTQPD NKLAALLCAR
INGSPACFAA CMDSSNEYKK ISPLLRKGEN EINQWADRHS VEHATVQAIQ WLTRAPDRFS
TAQFSPLLEH EQSSTQIINL LVWSGLCGWI NRLKIALGET Y