Gene SbBS512_E1470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1470 
Symbol 
ID6272200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1340852 
End bp1341595 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content60% 
IMG OID641725571 
Producttail assembly protein 
Protein accessionYP_001880077 
Protein GI187732549 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAGA CAGAATCAGC GATTCTGGCG CACGCCCGGC GATGTGCGCC AGCGGAGTCG 
TGCGGCTTCG TGGTGAGAAC ACCGGAGGGG GAAAGATATT TCCCCTGCGT GAATATCTCC
GGTGAGCCGG AGGCGTATTT CCGGATGGCT CCGGAGGACT GGCTGCAGGC AGAGATGCAG
GGTGAGATTG TGGCGCTGGT CCACAGCCAC CCCGGTGGTC TGCCCTGGCT GAGTGAGGCT
GACCGGCGGC TGCAGGTGCA GAGCGATTTG CCGTGGTGGC TGGTCTGCCG GGGGGCGATT
CACAAGTTCC GCTGTGTGCC GCATCTCACC GGGCGGCGCT TTGAGTACGG GGTGACGGAC
TGTTACACAC TGTTCCGGGA TGCTTACCAT CTGGCGGGGA TTGAGATGCC GGATTTTCAT
CGCGGGGATG ACTGGTGGCG TCACGGTCAG AATCTCTATC TTGACAATAT GGAGGCTACT
GGTTTTTACC GTGTCGCACT GACAGAGGCG CAGCCGGGCG ATGTGCTGCT GTGCTGTTTT
GGTTCATCGG TGCCGAATCA CGCCGCCATT TACTGCGGCG ACGGTGAGCT GCTGCACCAT
ATTCCTGAAC AACTGAGTAA ACGAGAGAGG TATACCGACA AATGGCAGCG ACGCACACAC
TCCCTCTGGC GTCACCGGGA ATGGCACGCA TCTGCCTTTA CGGGGATTTG CAACGATTTG
GCCGCCGCAT CGACCTTCGT GTGA
 
Protein sequence
MTETESAILA HARRCAPAES CGFVVRTPEG ERYFPCVNIS GEPEAYFRMA PEDWLQAEMQ 
GEIVALVHSH PGGLPWLSEA DRRLQVQSDL PWWLVCRGAI HKFRCVPHLT GRRFEYGVTD
CYTLFRDAYH LAGIEMPDFH RGDDWWRHGQ NLYLDNMEAT GFYRVALTEA QPGDVLLCCF
GSSVPNHAAI YCGDGELLHH IPEQLSKRER YTDKWQRRTH SLWRHREWHA SAFTGICNDL
AAASTFV