| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1289 |
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| Symbol | |
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| ID | 6270518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1178897 |
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| End bp | 1180402 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641725410 |
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| Product | head-tail preconnector protein GP5 |
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| Protein accession | YP_001879921 |
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| Protein GI | 187733565 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGACGTA ATCTTTCACA CATTATTGCC GCAGCATTCA ATGAACCGCT GCTTCTGGAG
CCCGCCTATG CGCGGGTTTT CTTTTGCGCG CTCGGGCGCG AGATGGGCGC AGCAAGTCTT
TCGGTACCAC AACAGCAGGT ACAGCTTGAT GCTCCCGGAA TGCTGGCTGA AACGGACGAG
TACATGGCCG GAGGTAAACG ACCGGCCCGT GTTTACCGGG TGGTGAACGG TATTGCGGTA
CTGCCGGTGA CCGGCACGCT GGTGCACCGG CTGGGGGGGA TGCGGCCATT TTCCGGAATG
ACTGGCTATG ACGGCATTGT CGCCTGTCTT CAGCAGGCAA TGGCAGATAG CCAGGTGCGG
GGCATACTGC TGGACATTGA CAGTCCGGGC GGGCAGGCCG CCGGCGCGTT TGACTGCGCT
GACATGATTT ACCGCCTCCG GCAGCAGAAG CCGGTCTGGG CACTGTGCAA TGACACGGCC
TGTTCTGCAG CCATGCTGCT GGCGTCGGCC TGCTCCCGAC GGCTGGTTAC CCAGACATCC
CGTATCGGCT CCATTGGCGT GATGATGAGC CATGTCAGCT ATGCCGGTCA TCTGGCGCAG
GCCGGTGTGG ATATCACGCT GATTTATGCC GGGGCGCACA AGGTGGATGG CAATCAGTTT
GAAGCGTTGC CGGCAGAGGT TCGCCAGGAT ATGCAGCAGC GGATTGATGC GGCGCACCGG
ATGTTTGCCG AAAAAGTGGC GATGTATACC GGGTTGTCTG TGGATGCGGT CACGGGAACA
GAGGCCGCCG TTTTTGAAGG TCAGTCCGGC ATTGAGGCCG GGCTGGCGGA TGAATTAATC
AATGCGTCGG ATGCCATCAG TGTGATGGCC ACGGCGCTGA ACAGTAATGT CAGAGGAGGC
ACTATGCCGC AATTAACTGC AACGGAAGCC GCCGTGCAGG AGAACCAGCG AGTGATGGGG
ATCCTGACAT GCCAGGAAGC GAAAGGACGT GAACAGCTTG CCACGATGCT GGCAGGGCAA
CAGGGCATGA GCGTTGAACA GGCCCGGGCG ATTCTGGCCG CGGCGGCACC GCAGCAGCCG
GTGGCATCCG CGCAGAGTGA AGCCGATCGC ATTATGGCGT GTGAAGAAGC GAACGGTCGT
GAACAACTGG CAGCAACGCT GGCGGCGATG CCGGAGATGA CGGTGGAAAA AGCCCGCCCG
ATCCTGGCGG CTGCACCACT GGCGAATGCC GGACCATCAC TCCGTGATCA GATCATGGCA
CTGGATGAGG CAAAAGGGGC TGAGGCGCAG GCTGAACAGC TGGCTGCCTG CCCGGGAATG
ACTGTGGAGA GCGCCCGGGC TGTGCTGGCT GCGGGATCAG GTAAGGCAGA ACCGGTCTCT
GCATCCACAA CCGCCCTGTT TGAACATTTC ATGGCGAACC ATTCACCGGC TGCGGTCCAG
GGGGGCGTGT CACAGGCATC AGAAGACGGT GATGCGGACG TGAAAATGCT CATGGCCATG
CCATGA
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| Protein sequence | MRRNLSHIIA AAFNEPLLLE PAYARVFFCA LGREMGAASL SVPQQQVQLD APGMLAETDE
YMAGGKRPAR VYRVVNGIAV LPVTGTLVHR LGGMRPFSGM TGYDGIVACL QQAMADSQVR
GILLDIDSPG GQAAGAFDCA DMIYRLRQQK PVWALCNDTA CSAAMLLASA CSRRLVTQTS
RIGSIGVMMS HVSYAGHLAQ AGVDITLIYA GAHKVDGNQF EALPAEVRQD MQQRIDAAHR
MFAEKVAMYT GLSVDAVTGT EAAVFEGQSG IEAGLADELI NASDAISVMA TALNSNVRGG
TMPQLTATEA AVQENQRVMG ILTCQEAKGR EQLATMLAGQ QGMSVEQARA ILAAAAPQQP
VASAQSEADR IMACEEANGR EQLAATLAAM PEMTVEKARP ILAAAPLANA GPSLRDQIMA
LDEAKGAEAQ AEQLAACPGM TVESARAVLA AGSGKAEPVS ASTTALFEHF MANHSPAAVQ
GGVSQASEDG DADVKMLMAM P
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