Gene SbBS512_E1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1249 
Symbol 
ID6270791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp1147174 
End bp1147830 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content43% 
IMG OID641725374 
Productrepressor protein C2 
Protein accessionYP_001879888 
Protein GI187733300 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000393675 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCTT TAGGTGAACG TCTCATCAAC GCACGGCAAA AAGCTGGGTT AACACAAGAT 
GCGTTGGCTA AAAAAGCTGG GATCACCAGA GTTGCAATCA GTAAAGCCGA GCAAGGCCTT 
ACAAAAAGTT TCAACGGTGA CACCCTTTTT AAAGTTGCAG CTGCACTGGG GTGTTCACCG 
CAGTGGCTTC AGAACGGAGA TGAAAAAGAT AAGCATTGGG AAAATAATGT TAAGAGCTGC 
CCACAGAGAG ACACAGCACA CTCTTACCCT GTAATTAACT GGGTTCAGGC AGGATTATTC 
GCAACTTCTG GTGATGACTA CAACATGTAT GATCAGGATA ATTGGAGGCA TTCTGTAAAA 
TACGCTGGTG AGAGGGGGTT CTGGCTGGAA GTGCACGGAG ACTCAATGAC TTCGCCCGTA 
GGAATAACAT TTCCTGAAGG AATGTCGATC CTTGTCAACC CAGATAAAGA AGTTTTTTCA 
GGGTGTTACG TCATCGCCAG AAAAAAATCC ACCAATGAAG CAACATTCAA AAAATATATT 
TCTGACATGG GAAAGGCGTT TCTAAAGCCC CTTAATCCAC AATATCCAAT CATAGAAATG 
GACAATGATT GCGAAATAGT AGGTGTTGTG GTTGATGCCA GGTGGGATAT TTTCTGA
 
Protein sequence
MKSLGERLIN ARQKAGLTQD ALAKKAGITR VAISKAEQGL TKSFNGDTLF KVAAALGCSP 
QWLQNGDEKD KHWENNVKSC PQRDTAHSYP VINWVQAGLF ATSGDDYNMY DQDNWRHSVK 
YAGERGFWLE VHGDSMTSPV GITFPEGMSI LVNPDKEVFS GCYVIARKKS TNEATFKKYI 
SDMGKAFLKP LNPQYPIIEM DNDCEIVGVV VDARWDIF