Gene SbBS512_E1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1227 
Symbol 
ID6271618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp1131560 
End bp1132240 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content53% 
IMG OID641725355 
Producthypothetical protein 
Protein accessionYP_001879869 
Protein GI187732235 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.118348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTGCCG ATAAGTCATT AAGCCCGTTT GAAATCCGGG TATACCGCCA TTACCGCATT 
GTGCATGGTA CTCGGGTCGC GCTGGCATTC CTGCTCACTT TTCTCATTAT CCGCCTGTTT 
ACTATCCCGG AAAGCACCTG GCCGCTGGTC ACCATGGTGG TGATTATGGG GCCAATCTCG 
TTCTGGGGTA ACGTTGTCCC TCGCGCCTTT GAGCGTATTG GCGGTACGGT GTTGGGTTCG 
ATTTTAGGTC TTATCGCTCT GCAACTGGAG TTAATCTCGT TACCGCTGAT GTTAGTCTGG 
TGCGCGGCGG CCATGTTCCT TTGCGGTTGG CTGGCGCTGG GCAAGAAACC GTATCAAGGT 
TTATTGATTG GGGTGACGCT GGCAATTGTT GTGGGTTCCC CGACAGGTGA AATTGATACG 
GCGTTATGGC GAAGCGGCGA TGTGATCCTC GGCTCTTTAC TGGCAATGTT GTTTACCGGT 
ATCTGGCCAC AACGGGCGTT CATCCACTGG CGCATTCAAC TGGCGAAAAG TCTGACCGAG 
TATAATCGGG TCTTGTATTA TCCCTCCAGT GCAGAGAAAA TCGGCCAGTT TTCTCTGCCT 
GCAGTCCGCA TGCCGTATCG GGCCTTGGGT TCTAACCTGT TGCGTAGATT TATGCAGCGG 
ACTGCCTTTC TCCCAAAGTG A
 
Protein sequence
MRADKSLSPF EIRVYRHYRI VHGTRVALAF LLTFLIIRLF TIPESTWPLV TMVVIMGPIS 
FWGNVVPRAF ERIGGTVLGS ILGLIALQLE LISLPLMLVW CAAAMFLCGW LALGKKPYQG 
LLIGVTLAIV VGSPTGEIDT ALWRSGDVIL GSLLAMLFTG IWPQRAFIHW RIQLAKSLTE 
YNRVLYYPSS AEKIGQFSLP AVRMPYRALG SNLLRRFMQR TAFLPK