| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0919 |
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| Symbol | |
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| ID | 6271179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 857586 |
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| End bp | 858113 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641725080 |
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| Product | outer membrane porin protein LC |
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| Protein accession | YP_001879607 |
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| Protein GI | 187732735 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00124369 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTGGAG ATTCAGGGGG CCAGTCTACG TTGTCTATAG ACTACAACAT CGAAGGTTTT
GGTTTTGTAG GTGCATATAG CAAATCTGAT CGTACTAATG AACAAGTTGG TGACGGCTAC
GGTGATAACG CTGAAGTGTG GTCATTAGCA GCCAAGTATG ATGCAAATAA TATCTATGCA
GCAATGATGT ACGGTGAAAC CCGCAACATG ACCGTTTTGG CTAATGATCA TTTTGCAAAT
AAAACCCAAA ACTTTGAAGC TGTTGTACAG TATCAGTTCG ACTTCGGTTT ACGTCCGTCT
TTAGGCTACG TATATTCCAA AGGCAAAGAT CTTTATGCTC GTGATGGACA TAAAGGTGTT
GATGCTGACC GCGTAAATTA TATCGAAGTT GGTACCTGGT ACTACTTCAA TAAGAACATG
AACGTCTACA CAGCATACAA ATTTAACCTG CTGGATAAAG ACGATGCAGC GATTACCGAT
GCCGCAACTG ATGACCAGTT TGCAGTTGGT ATCGTCTACC AGTTCTAA
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| Protein sequence | MSGDSGGQST LSIDYNIEGF GFVGAYSKSD RTNEQVGDGY GDNAEVWSLA AKYDANNIYA
AMMYGETRNM TVLANDHFAN KTQNFEAVVQ YQFDFGLRPS LGYVYSKGKD LYARDGHKGV
DADRVNYIEV GTWYYFNKNM NVYTAYKFNL LDKDDAAITD AATDDQFAVG IVYQF
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