Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0895 |
Symbol | |
ID | 6269402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 835372 |
End bp | 836145 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641725057 |
Product | phage portal protein, lambda family |
Protein accession | YP_001879584 |
Protein GI | 187730057 |
COG category | [R] General function prediction only |
COG ID | [COG5511] Bacteriophage capsid protein |
TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGCAG CGACGATTGA AAGTGACCTT GATACCGAAA AGGCCTTTGA ATATATCGCC GGTGCGCCGC AGGGGCAGAA GGATAATCCG CTTATTAATA TTCTGGATAA GTTCTCCACC TGGTATGACA CGAATAGCGT GATGCTGGGC GGTGTCAAAA TTCCGCACCT TTTCCCCGGT GATGATCTGA AACTTCAGAC CGCGCAGGAT TCAGACAATG GATTTTCGGC GCTTGAACAG GCGCTGCTGC GGTATATCGC CGCCGGTCTT GGCGTTTCCT ACGAACAGTT GTCCCGTGAT TACTCGAAGG TCAGTTACTC AAGTGCCCGC GCATCCGCCA ATGAGTCGTG GCGCTATTTT ATGGGGCGGC GAAAATTTAT TGCGTCCCGG CTGGCCACGC AGATGTTTTC CTGCTGGCTG GAAGAGGCAC TTCTTCGGGG GATTATTCGT CCGCCACGGG CACGGTTTGA TTTTTATCAG GCGCGATCAG CCTGGTCACG GGCTGAGTGG ATTGGAGCCG GAAGAATGGC CATTGACGGG CTCAAGGAGG TTCAGGAATC AGTGATGCGC ATTGAGGCCG GACTGAGCAC GTATGAGAAA GAGCTGGCGC TGATGGGCGA GGATTATCAG GACATTTTCT GCCAACAGGT CAGGGAATCT GCAGAGCGGG AAAAAGCCGG ACTCTCACGT CCGGTGTGGA TAGCGCAGGC GTATCAGCAG CAGATAGCGG AGAGTCGCAG GCCGGAAGAG GAGACAACAC CACGTGAGAC GTAA
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Protein sequence | MYAATIESDL DTEKAFEYIA GAPQGQKDNP LINILDKFST WYDTNSVMLG GVKIPHLFPG DDLKLQTAQD SDNGFSALEQ ALLRYIAAGL GVSYEQLSRD YSKVSYSSAR ASANESWRYF MGRRKFIASR LATQMFSCWL EEALLRGIIR PPRARFDFYQ ARSAWSRAEW IGAGRMAIDG LKEVQESVMR IEAGLSTYEK ELALMGEDYQ DIFCQQVRES AEREKAGLSR PVWIAQAYQQ QIAESRRPEE ETTPRET
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