Gene SbBS512_E0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0892 
Symbol 
ID6272727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp832407 
End bp833435 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content54% 
IMG OID641725054 
Productphage major capsid protein E 
Protein accessionYP_001879581 
Protein GI187733048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTGT TTACGACCCG CCAGTTACTC GGTTATACCG AACAAAAAGT GAAATTCCGT 
GCGCTGTTTC TGGAGCTGTT TTTCCGCCGT ACGGTGAATT TCCACACCGA AGAGGTGATG
CTGGACAAAA TTACCGGAAA AACGCCGGTG GCGGCCTATG TCTCCCCGAT CGTTGAAGGA
AAAGTGCTTC GCCATCGCGG TGGTGAAACC CGCGTGTTAC GTCCGGGCTA CGTCAAGCCC
AAACACGAAT TTAATTACCA GCAGGCGGTT GAGCGCCTTC CTGGTGAAGA TCCGGCTCAG
CTGAACGACC CGGCCTACCG TCGTCTGCGT ATCATTACCG ATAACCTCAA ACAGGAAGAG
CACGCCATTG TCCAGGTGGA AGAAATGCAG GCGGTGAATG CCGTGCTGTA TGGCAAATAC
ACCATGGAAG GGGATCAGTT TGATACTGTC GAGGTGGATT TCGGGCGCTC TGAAGGAAAT
AACATTGAGC AGGCTGACGG TAAAAAATGG TCTGAGCAGG ACCGTGATAC GTTTGATCCG
ACGCATGATA TTGACCTCTA CTGCGATCAG ACCAGCGGCC TTGTGAATAT CGCCATTATG
GACGGTACGG TCTGGCGTCT GCTGAATGGC TTTAAGCTGT TCCGCGAAAA ACTGGATACC
CGTCGCGGCT CAAATTCACA ACTCGAAACG GCAGTGAAAG ACCTGGGGGC GGTGGTGTCC
TTCAAGGGGT ATTACGGCGA TCTGGCCATT GTGGTGGCGA AAACGTCTTA TGTGGCAGAG
GACGGTACCG AAAAACGTTA TCTGCCGGAG GGCACACTGG TCCTGGGGAA TACGGCAGCA
GAGGGCATTC GTTGCTATGG TGCCATTCAG GATGCGCAGG CGTTGTCCGA AGGTGTGGTG
GCCTCTTCCC GTTATCCGAA ACACTGGCTG ACTGTGGGCG ATCCGGCCCG TGAATTCACC
ATGACGCAGT CCGCACCGCT GATGGTGCTG CCGGATCCGG ATGAGTTTGT GGTGGTACAG
GTGAAATAA
 
Protein sequence
MGLFTTRQLL GYTEQKVKFR ALFLELFFRR TVNFHTEEVM LDKITGKTPV AAYVSPIVEG 
KVLRHRGGET RVLRPGYVKP KHEFNYQQAV ERLPGEDPAQ LNDPAYRRLR IITDNLKQEE
HAIVQVEEMQ AVNAVLYGKY TMEGDQFDTV EVDFGRSEGN NIEQADGKKW SEQDRDTFDP
THDIDLYCDQ TSGLVNIAIM DGTVWRLLNG FKLFREKLDT RRGSNSQLET AVKDLGAVVS
FKGYYGDLAI VVAKTSYVAE DGTEKRYLPE GTLVLGNTAA EGIRCYGAIQ DAQALSEGVV
ASSRYPKHWL TVGDPAREFT MTQSAPLMVL PDPDEFVVVQ VK