Gene SbBS512_E0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0849 
Symbol 
ID6269307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp798067 
End bp798606 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content51% 
IMG OID641725020 
Productnickel/cobalt efflux system RcnA 
Protein accessionYP_001879547 
Protein GI187731696 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCATTA TTAGCACCGC GTTCTGGATG TTCTGGCGTA CCTGGCGCGG CGAACGCAAC 
TGGCTGGAGA ATATGCACGG GCATGATTAT GAGCATCATC ATCACGATCA CGAACATCAC
CACGACCATG GACATCATCA CCATCACGAA CATGGCGAGT ATCAGGATGC CCATGCACGA
GCCCATGCCA ATGACATTAA ACGACGCTTT GATGGTAGAG AGGTCACCAA CTGGCAAATT
TTGTTATTTG GCTTAACCGG TGGCCTTATC CCCTGCCCGG CAGCAATTAC CGTGCTGTTG
ATATGCATTC AGTTGAAAGC CCTGACACTG GGCGCAACAC TGGTCGTCAG TTTCAGCATT
GGCCTGGCGT TAACGCTTGT CACCGTAGGC GTTGGCGCAG CAATCAGCGT TCAGCAGGTC
GCAAAACGCT GGAGCGGATT TAACACTCTC GCTAAACGCG CCCCCTATTT TTCCAGTCTG
TTGATTGGCT TAGTCGGTGT GTATATGGGC GTACATGGCT TCATGGGCAT AATGCGATAA
 
Protein sequence
MIIISTAFWM FWRTWRGERN WLENMHGHDY EHHHHDHEHH HDHGHHHHHE HGEYQDAHAR 
AHANDIKRRF DGREVTNWQI LLFGLTGGLI PCPAAITVLL ICIQLKALTL GATLVVSFSI
GLALTLVTVG VGAAISVQQV AKRWSGFNTL AKRAPYFSSL LIGLVGVYMG VHGFMGIMR