| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0751 |
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| Symbol | |
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| ID | 6271163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 707498 |
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| End bp | 708787 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641724937 |
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| Product | putative autotransporter, IS5K-containing |
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| Protein accession | YP_001879465 |
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| Protein GI | 187733636 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACG CAAATGTGAT TATGATGGAT GAGCCAGTGA CTCGTTCATC AGTGACGGCA
AGTGCGGAAA ATTTCATTAC GTTGACCACC AATACCCTGT CGGGAAACGG CAATTTTTAT
ATGCGTACCG ATATGGCTAA TCATCAGAGC GATCAGCTCA ACGTCACCGG TCAGGCAACA
GGTGATTTCA AAATATTCGT GACGGACACC GGTGCCAGCC CGGCAGCAGG AGATAGCCTT
ACACTGGTAA CAACGGGCGG CGGTGATGCT GCATTTACGT TGGGCAATGC CGGAGGCGTT
GTTGATATCG GTACGTATGA ATATACCTTG CTGGATAATG GCAACCATAG CTGGAGTTTG
GCAGAGAATC GCGCGCAAAT TACCCCTTCA ACCACTGATG TGCTGAATAT GGCGGCCGCA
CAACCGCTGG TATTTGATGC AGAACTGGAC ACCGTGCGTG AGCGTCTTGG TAGCGTAAAA
AGCGTTAGTT ACGATACGGC GATGTGGAGT TCGGCAATTA ACACCCGCAA CAACGTGACC
ACTGATGCGG GAGCTGGTTT TGAGCAAACA TTGACGGGCC TGACGCTCGG TATCGATAGC
CGTTTCTCCC GTGAAGAAAG CAGTACAATT CGCGGCTTGT TCTTTGGTTA CTCTCATTCT
GATATTGGTT TTGATCGCGG CGGAAAAGGT AATATCGATA GCTATACCCT GGGGGCTTAT
GCCGGTTGGG AGCATCAGAA CGGTGCCTAT GTTGATGGGG TGGTGAAAGT TGACCGTTTT
GCCAACACCA TCCATGGCAA GATGAGTAAT GGGGCAACAG CGTTTGGCGA TTACAATAGT
AACGGCGCGG GTGCTCATGT TGAGAGCGGG TTCCGTTGGG TTGACGGATT GTGGAGTGTT
AGACCCTATC TGGCCTTTAC CGGCTTTACC ACAGATGGTC AGGACTACAC GTTATCAAAC
GGCATGCGCG CTGATGTGGG AAATACCCGG ATATTACGCG CTGAAGCGGG AACGGCGGTA
AGCTATCACA TGGACCTGCA AAATGGTACG ACGCTGGAAC CCTGGCTGAA AGCCGCCGTA
CGTCAGGAAT ACGCCGATTC TAACCATGTG AAAGTTAATG ACGATGGCAA ATTTAATAAT
GATGTGGCTG GAACCCCTGG CGTTTATCAG GCTGGGATAA GGTCATCGTT TACCCCGACG
TTAAGCGGTC ATTTGTCAGT CAGCTATGGC AATGGCGCAG GGGTAGAATC GCCGTGGAAT
ACTCAGGCGG GAGTGGTCTG GACGTTCTGA
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| Protein sequence | MSDANVIMMD EPVTRSSVTA SAENFITLTT NTLSGNGNFY MRTDMANHQS DQLNVTGQAT
GDFKIFVTDT GASPAAGDSL TLVTTGGGDA AFTLGNAGGV VDIGTYEYTL LDNGNHSWSL
AENRAQITPS TTDVLNMAAA QPLVFDAELD TVRERLGSVK SVSYDTAMWS SAINTRNNVT
TDAGAGFEQT LTGLTLGIDS RFSREESSTI RGLFFGYSHS DIGFDRGGKG NIDSYTLGAY
AGWEHQNGAY VDGVVKVDRF ANTIHGKMSN GATAFGDYNS NGAGAHVESG FRWVDGLWSV
RPYLAFTGFT TDGQDYTLSN GMRADVGNTR ILRAEAGTAV SYHMDLQNGT TLEPWLKAAV
RQEYADSNHV KVNDDGKFNN DVAGTPGVYQ AGIRSSFTPT LSGHLSVSYG NGAGVESPWN
TQAGVVWTF
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