Gene SbBS512_E0231 details

Gene Information

• Locus tag: SbBS512_E0231
• ID: 6271579
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 237916
• End bp: 238482
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641724478
• Product: putative release factor H-coupled RctB family protein
• Protein accession: YP_001879029
• Protein GI: 187730289
• COG category: [S] Function unknown
• COG ID: [COG1690] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR03073] release factor H-coupled RctB family protein

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAATT ATATTCGTCC CTTATCCGAT GCGGTATTTA CCATCGCATC TGATGACCAG 
TGGATCGAGA GTTTAGCGAT CCAACAATTA CACACCACGG CAAATTTACC CAACATGCAG 
CGCGTAGTGG GGATGCCAGA TTTACATCCC GGACGCGGCT ATCCGATTGG CGCAGCGTTC 
TTCTCTGTTG GTCATTTTTA TCCGGCACTG GTCGGCAATG ATATCGGCTG CGGTATGGCG 
CTATGGCAAA CAGATATTCT CGCTCGCAAA TACAACGCCG ATAAGTTTGA AAAGCGATTA 
TCAGATCTGG ATGACGTTGC TGAAGAAAGC TGGCTGGAGG AAAACCTGCC GTCAGCATTT 
GCACAGCATC CTTGGTGCAG CTCGCTTGGC TCTATCGGTG GCGGCAATCA TTTCGCTGAA 
CTGCAACAAG TTGATCAAAT CATCAACGCT GAACTGTTTG CACTAGCAGG TCTGGATGCA 
CAACATCTGC AACTGTTGGT TCATAGCGGC TCGCGGGGGG TGCCCCTATT AAGTTGTCAA 
GCATGTTATG ACCCCTGCGG GGTATAA 

 

Protein sequence

MGNYIRPLSD AVFTIASDDQ WIESLAIQQL HTTANLPNMQ RVVGMPDLHP GRGYPIGAAF 
FSVGHFYPAL VGNDIGCGMA LWQTDILARK YNADKFEKRL SDLDDVAEES WLEENLPSAF 
AQHPWCSSLG SIGGGNHFAE LQQVDQIINA ELFALAGLDA QHLQLLVHSG SRGVPLLSCQ 
ACYDPCGV