Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0223 |
Symbol | |
ID | 6272839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 232357 |
End bp | 233106 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641724472 |
Product | YafL |
Protein accession | YP_001879023 |
Protein GI | 187732220 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCGT TCTTGCTCGG CAGATTTCTG CATCCAGGCG TGTTTTCGTT ATGCGTTTTG CTCCCTTTAC TCGCCAGCGC CACCACATCA CATATCTCTT TCAGCTACGC CGCCCGCCAG CGGATGCAAA ACCGTGCGCG TTTATTAAAA CAGTACCAAA CCCATCTGAA AAAACAGGCC AGCTACATTG TGGAAGGCAA TGCCGAAAGC AGAAGGGCGC TACGCCAGCA CAACCGGGAG CAGATAAAAC AGCATCCAGA ATGGTTTCCT GCGCCGCTCA AGGCAAGTGA CAGACGCTGG CAGGCGTTGG TAGAAAACAA TCATTTCCTC AGCAGCAACC ACCTGCATAA TATCACCGAA GTGGCGATTC ACCGTCTGGA GCAACAGCTT GGCAAGCCTT ACGTCTGGGG CGGCACGCGG CCCGATCAAG GCTTCGACTG TAGCGGGTTG GTTTTTTATG CCTACAACAA GATCCTTGAG GCTAAGCTCC CGCGCACGGC TAATGAGATG TATCACTACC ATCGGGCAAC CATTGTGGCA AATAACGACC TGCGCCGGGG AGATTTGCTG TTTTTCCATA TCCACAGCCG TGAAATTGCC GACCATATGG GCGTGTATCT GGGAGACGGT CAGTTTATTG AGTCGCCGCG CATGGGGGAA ACCATTCGGG TAAGTCGGTT AGCTGAACCT TTCTGGCAGG ATCATTTTTT GGGCGCGCGG TGGATATTGA CGGAAGAGAC GATTTTGTAG
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Protein sequence | MSSFLLGRFL HPGVFSLCVL LPLLASATTS HISFSYAARQ RMQNRARLLK QYQTHLKKQA SYIVEGNAES RRALRQHNRE QIKQHPEWFP APLKASDRRW QALVENNHFL SSNHLHNITE VAIHRLEQQL GKPYVWGGTR PDQGFDCSGL VFYAYNKILE AKLPRTANEM YHYHRATIVA NNDLRRGDLL FFHIHSREIA DHMGVYLGDG QFIESPRMGE TIRVSRLAEP FWQDHFLGAR WILTEETIL
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