| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2163 |
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| Symbol | |
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| ID | 6274756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2633224 |
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| End bp | 2635986 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642614223 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_001878751 |
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| Protein GI | 187736639 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.591838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.290265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGCCC GTCTTTTGCT TATTCCCTTT ATTTTTTCCG TTCCGGCTTA TGGCCAGGAC
ATTCCGTCCG CCGCAGCGGC AAATCCCCCC GGGCAGGTGA AATACGCTCC GGTCCGGAAC
CTCTCCCAAC TGCCTATGGA CGGCGGCTGG ACGTACGGGG AAGTGCTGGA CAAAGCCGCG
GCTGGAGACT TCCGGGCCAA TATGCTGGCC GGGGAATACT GGATGGGGCT TTATTACCTG
AACCGTGGAG ACCTGCCGCT GGCCTGCCTG GAACATATGC AGCATTTTTT CCGTGATGCG
GCCACGGCAT CCGGCCATCC GGCACCCAAG CTCATGATGA CGGATCCTTA CGGGATTTTC
GGGATTTTCA AGGCGCAACC CATGCAACCG GAACATGCGG AATGGCTGGC TGCCTGCCGC
AAGCTTGCGG AAAAGGGAGA CATGGATGCC GTTACGGCCC TGTACACCGT CACGGATCTT
CCGGAAGCCG AGTTGAGACG CTACCTGGCC CCCCTGGAAA AGAAGGCCGC TTCCGGCGAC
CAGGATGCGC TGTCCCAGCT CGCTTTCATC AAAGTGGATT GGCTGAAGGA AAATCCCGCC
AACGTTATCG AGACCCTGAA GCAATACCGG AAAAACGCCA AACCGGTTCT TCTGGCGCGG
ATAGGGGAAC TGGCCCTTGC CCTGGACGGC AAGGACGGCA GGGGATGGAG GGATACGGCC
ATTCAATCCC TTTCCCGGGC TGCGGAAAAG GGGCACGCGG GGGCCATGCG GCTTCTGGCG
GAATTGACGA AGGGGGCCGC ACCGGCACAG GCCGGAAAGC TTTTGGCGGA ACTGCGCTCC
AGAGGGGATC TGGAAACTCT GCTGGCGGAC CTCTCCGCCG GCATGAAGGA AAAAACAGGG
GGAGGTAAAA GCTCCCTCCT CCAGCCTTTG TTCGAGCAGG CCAGGAAACT GGGCAGCAAT
AACGCCTGTG CCTGGTACGC CCAGTTAATT TCCGAAGCGC AGCCCCCGCA GGAACAGGAG
CTGCGCAAGG CGGCCCTTGA TCTGCTGTCC CTTCATGACG AACGGGGCAT GCCATACCTG
AAGGAACCTC TGTCCTTCCC CCAGAAAAAA CTCAACCAGC TTCCCCCCTA CGCCAAGACA
CATAAGGAGC TTGAGCTGGC CTCTCAGCTT GGGGACGCAG ATTCCAGCGT ACAGTTGGGC
GAGCTGTGGA AGGAGGAACT GGCCAATACA CTGGATTCCG TAGGGAAGGC CCATGAAGCG
CGGGAAAATA TGCGCGTATG GTACAGGCAG GCGGCGGAGG AAGGCCACCC CCTGGCCAGG
CTGCGCCTGG CCCAAATGGA AAACCCGGAC TTAATGGACA AACCGTCCGC AGAACCTGCC
AGAACGCTGC TGAACGATTG CCTGGCAAAA GCCGCCGCAG GAGATTTCAT CACGCTGAAA
GGAATTTCCG AATACGTCAC GCCGGAACAA TGGGAACAGC TGACCGCCAC CCTCCGTAAA
AAAGCTCAGG GGGGGAACGC CCGCAGCCAG GCGGATCTGG CATACCTGAT GTTATTCAGT
TACAGGAGCG AAGAATCCGG CTACCCGGAA GCCCTGGCCT GGGCCCGGCT TTCCGCCGGA
CAGGGAGATC CCTGCGGCAT GTACGTGCTC GGCCGCGCCC TCATTTATGA ATTCGGCCTG
GAAAAACGCA TGGCCGAGGG GGATTCCTGG ATGTTCCGGG GAGCCTTGAA AGGCCATGTG
GATGCGGCGG ACATGTGGAG TTCCAACAAT GAGAACCTGC AGCCTTACAG CGCCATGATG
CACGGTCTGG CGGCACGGGG GCATATCCCC TCCCTGCTTT TCCTGGCCAA CCAGGCGGCC
TATCCCCAGA ATACGGGGGA AACAGCGGCC CTGGACAACG GATTCACTTC CGCCTGCCAG
CAGGTCAAGC TGACCCTGAA CGGAGGGGAC GCCAACACTC CGCCGTGGCT CCGGAAACCG
GAACAGAAGG GTAAGGGGGA AGATATTCCG GCGGATGCCG GAACCGTTCC TCCCTGGATG
ACCCCGTCCG GCAGGGAACG CCAGGCCCCG GCCCCGAAAA CCATCAATCC GGAAGCCGTG
AAGTTCTGGG AACAAGCTGT GGAACTCGGC AGCCTGACGG CACTGGACGA GCTGGCCAAT
TATTATGAAA CCGTGGCAGG GAATGTGCAG GAGCCTGCGG AACGGCAGCA GCTTCTGGCC
TCTGCCATGA CGGCAGCCAC CGCCCTGGTG AAAAAGGAGG ACGTACGCGG TTTCAAGAGG
CTGGCCCGCT ATTACGAGCA GGGCATCGGC GTGCAGCCGA ACAGGGAACT GTACAAGGAT
TATGTACTGA AAGCCGCGGA AACCAGGGAT CCGGAAGCTC TGGTGGAGAA GGCGCGCCTG
CTCATCAAGG GAGAGGATCT GGAGCCGGAC CCGAAAATGG CGCTGGATAT TCTGACCGAT
CTGGAAGAGA ACCAGACGCA TGCGGTGCCC GGCATGCATT TCCTGCTCGG CTACTTGCAT
GAAGAAGGCC TCGGCACCCC GCAGGATATG GCCCTGGCCT ATCAGTTTTA CATCAAGGGG
GCGGAACAGG ACGACGCCAA GTGCATGAAC AACCTGGGTT CCATGTATGA ACGCGGAACT
GGCGTAGCCA AGAACCTGGC CGAAGCCCAA AAGTGGTATG AACGGGCGGC GGAGCTGGGG
AATGAAGACG CTCTTGCCAA TGTGGAACGG GTAAGGGAAA AACTCAACAC GAAGAAGAAA
TAG
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| Protein sequence | MRARLLLIPF IFSVPAYGQD IPSAAAANPP GQVKYAPVRN LSQLPMDGGW TYGEVLDKAA
AGDFRANMLA GEYWMGLYYL NRGDLPLACL EHMQHFFRDA ATASGHPAPK LMMTDPYGIF
GIFKAQPMQP EHAEWLAACR KLAEKGDMDA VTALYTVTDL PEAELRRYLA PLEKKAASGD
QDALSQLAFI KVDWLKENPA NVIETLKQYR KNAKPVLLAR IGELALALDG KDGRGWRDTA
IQSLSRAAEK GHAGAMRLLA ELTKGAAPAQ AGKLLAELRS RGDLETLLAD LSAGMKEKTG
GGKSSLLQPL FEQARKLGSN NACAWYAQLI SEAQPPQEQE LRKAALDLLS LHDERGMPYL
KEPLSFPQKK LNQLPPYAKT HKELELASQL GDADSSVQLG ELWKEELANT LDSVGKAHEA
RENMRVWYRQ AAEEGHPLAR LRLAQMENPD LMDKPSAEPA RTLLNDCLAK AAAGDFITLK
GISEYVTPEQ WEQLTATLRK KAQGGNARSQ ADLAYLMLFS YRSEESGYPE ALAWARLSAG
QGDPCGMYVL GRALIYEFGL EKRMAEGDSW MFRGALKGHV DAADMWSSNN ENLQPYSAMM
HGLAARGHIP SLLFLANQAA YPQNTGETAA LDNGFTSACQ QVKLTLNGGD ANTPPWLRKP
EQKGKGEDIP ADAGTVPPWM TPSGRERQAP APKTINPEAV KFWEQAVELG SLTALDELAN
YYETVAGNVQ EPAERQQLLA SAMTAATALV KKEDVRGFKR LARYYEQGIG VQPNRELYKD
YVLKAAETRD PEALVEKARL LIKGEDLEPD PKMALDILTD LEENQTHAVP GMHFLLGYLH
EEGLGTPQDM ALAYQFYIKG AEQDDAKCMN NLGSMYERGT GVAKNLAEAQ KWYERAAELG
NEDALANVER VREKLNTKKK
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