Gene Amuc_2135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_2135 
Symbol 
ID6274700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2601525 
End bp2602256 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID642614197 
Producthypothetical protein 
Protein accessionYP_001878725 
Protein GI187736613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.173128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.269343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATG CCCTGACGCT GCTCGTCTTC TCCGCCTGTC TGGGAGCCTG CGCCCCGGGA 
ATACCGGAAA TCCCGCCTCC CGCTTCTTCC GTCACCCGCC GTGAAGCCCT GGCAGCCAGC
CGGGCCTATA CCTCCATGAT TTGGCGGGGC TCTCTCCGGA ATGTCCGCCA CGGGACGGAC
GGGGACGGCA TCCGGACAGA CACGCCGGAC GCCTCCGCAG CCGGATATGA TGCCGGAGCA
TGGTGGAAAC CGGGCATGCG TTCCATCGGC ATGCCGTACA AATGGGGCGG CTTCGACACC
CCGCGACAGT TCTCCGAACG CCTGAAGGCG GATGCCGCCA ACGGAGGGCT TCCCGCTGCG
GCCGGCGACA TGGGCACCCC GGAAAAGCAG GCCGCGGGAG ACGCCGCCGT CAGCCGCTTT
GCCGCCGGAG TGGACTGCTC CGGCTTCGTC TCCCGCTGCT GGCGGCTGGA CAGGCCCTTT
TCCACACGGG AACTCCCCGC CCTCTGCACG CGGCTTCCCT CCTGGGAAGA CCTCCGGACG
GGAGACATCC TGATTGTGCC GGGGCGCCAT GTGCTCCTGT TCATTCAGTG GGAGGGAACG
GAAAAGAGCA GGTTCCTGGG CAGTGAAGCC GGCCCCCTGC CGGCCTGGAA ATGTTCGGAG
CATGTGTTCA GCCGCTCCAT GCTGGAAAAC AGCGGTTACC GCCCCATGAG ATACAGGGGC
ATGCGGGACT AA
 
Protein sequence
MTNALTLLVF SACLGACAPG IPEIPPPASS VTRREALAAS RAYTSMIWRG SLRNVRHGTD 
GDGIRTDTPD ASAAGYDAGA WWKPGMRSIG MPYKWGGFDT PRQFSERLKA DAANGGLPAA
AGDMGTPEKQ AAGDAAVSRF AAGVDCSGFV SRCWRLDRPF STRELPALCT RLPSWEDLRT
GDILIVPGRH VLLFIQWEGT EKSRFLGSEA GPLPAWKCSE HVFSRSMLEN SGYRPMRYRG
MRD