Gene Amuc_2097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_2097 
Symbol 
ID6274517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2549302 
End bp2550306 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content50% 
IMG OID642614159 
Productnitroreductase 
Protein accessionYP_001878687 
Protein GI187736575 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGC TGAATCTCCT GAAAAAAATT TCCAACCGTC TCAATGCCAT ATGTTACACG 
CGTTCCAGCC GTTATAAACT AAGGTATCTT TATTCCTACG ACCGTAAAAG ATTTATCCGC
CATGCAGGCT CCCTTCACCA TGAGGAAGAA GAACAGAAAC TGGCATCTGT CATCATGGCC
TACCATGTAT TGGAAAAAGG ATTAAGCATG CCTGAAAGAC GTCTGGGATT TGGACATGAT
GCCGTCCTGA ACCTCATCAG TCTGATAAGG GATTATTCAG AAAAGTTCCC TCAAAATGAT
CAAATCCTGC ATGCCATCTC CGTCTTGGAC GCTTACCGCG AAATGCACAG AAAAGAAAAC
TTCAGCCTCC GTCCGGATCT CCAGCAGGCG CTGGACAGCC TGCTGGCGGA CTTCCCCCCT
GCGGTCAAGG AAGACGGTCA GATAGAAATG ACCAGGGAAC AATATTATGC CCATTTGGAA
TCCTCCTTTC CCGAATTTTC GGCATCCCGC CATTCCGTGC GTCACTTCAA TGGCCCGGTT
TCACTGGAAC AAATAGAACA GGCCGTATCC CTTGCCCGCA ATGCCCCATC CGCCTGCAAC
AGGCAGCATG CCCGCGTCCA TTGCATCTGT GACAAGGAAA CCCGGAAAAA AGTGCTTTCC
CTCCAGAATG GAAACAGGGG ATTCGGTCAT TTGGCTGATA AGCTGCTCAT TATTACCGCG
GATCTCCACG ACATCCGCTG GGAGGAAGAA AGGAACGACC TGTACACTAA CGCAGGCATC
TTTCTGATGA ATCTCTGTTA TGCCCTTCAT GCCAACAAGG TAGCCCACTG CCTCCTGAAC
TGGTCCGTAT CCCCCTTTCA GGATATCCGG TTGAGGCAGC TGGTTTCCAT TCCCGACCAT
GAAAGCATCA TCTGCATTCT TGCCTGCGGT GATTGCCCGG AAAACTTCAG ATTAGCGCCT
TCGCCTCGTA AACCTGTCAG CCGGATATTA ACCGTACACC GGTAA
 
Protein sequence
MNMLNLLKKI SNRLNAICYT RSSRYKLRYL YSYDRKRFIR HAGSLHHEEE EQKLASVIMA 
YHVLEKGLSM PERRLGFGHD AVLNLISLIR DYSEKFPQND QILHAISVLD AYREMHRKEN
FSLRPDLQQA LDSLLADFPP AVKEDGQIEM TREQYYAHLE SSFPEFSASR HSVRHFNGPV
SLEQIEQAVS LARNAPSACN RQHARVHCIC DKETRKKVLS LQNGNRGFGH LADKLLIITA
DLHDIRWEEE RNDLYTNAGI FLMNLCYALH ANKVAHCLLN WSVSPFQDIR LRQLVSIPDH
ESIICILACG DCPENFRLAP SPRKPVSRIL TVHR