| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2052 |
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| Symbol | |
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| ID | 6274693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2498201 |
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| End bp | 2499331 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642614113 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001878643 |
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| Protein GI | 187736531 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.916961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATAG TGATGAAGCT TTATATTATA GCAGGCGAAA AGAGCGGGGA CATTCATGGC
GCCCTGCTGT TGAAGAATCT GCTGCGCCTG ATGCCCGGCA TGGAGGTCGC AGGGTTGGGC
GGCCAGGGCA TGCACGCGTT ATGTCCCGGC GTGGAAGACT GGGCGGATGA AGCCGCCGTT
ATCGGCGTGG TGGAGGTGCT CAAAAAATAC GGATGGTTCA GAAGGCGTTT TCTCTCCATT
CTGGAAAGGA TACGGCAGGA CCAGCCGGAT TGCCTTGTTT TGATTGATTA TCCGGGGTTT
AATCTGCGGC TGGCGGAGAG GGTCCGCAAG TGCTGCCCCC GCACCAGAAT CGTTTATTTT
ATCTCCCCGC AGGTGTGGGC ATGGCATCGC GGGCGCATTC CCAAGATGGT GCGCATGCTG
GATTTGATGA TGTGCATCTT CCCTTTTGAG GCTCCCTTGT TCCAGGAAGC CGGACTGAGA
ACGGAGTTTG TGGGGCATCC CCTGGTAGAT GAAATTGCTT CCATCCGTAA GGAGGGCGTC
CGGGATCCGT CACTGGTCGG TCTTTTTCCC GGCAGCCGGA ACCGTGAAAT TGACAGGCAT
TTCCCGGTAT TTATAGAGGT AGTGAACCGC CTTTCCCGGG AACGTCCGGA ACTGTCTTTT
GAAACCGCCG CTTCCACGGA GGCTCTGGCG GAAAGAATGC GCGGCATGGT GCGGAAGGCC
GGCATGCCTC CGGAACTGTT CCACATTGCG GTGGGAAAAT ATCATGAGCT GATGGACCGC
GCCGCCGTGG GAATTGTGGC TTCCGGCACC GCCACGATGG AAGCCGCCTT GCACCGTCTG
CCGTACATGC TGGTGTACAA GGTTCCCCTG CTGACGTACT GGATGGCCCG CATGCTCATC
AAAATACGCT TCATCGGCAT GGTGAATATC CTGGCGCAGA AACCCGTGGT GAAGGAGCTG
GTTCAGTTTG ATTTTACACC GGACAAGGTG ATTGATGAAA TAGAACGCCT GCTTGTTCCG
GAAAACAGGG ATGTCCTGCT GGAGGAAATG AAACAGGCCT CCGACAAGTT GGGGCAGGGA
GGGGCGGCGG AACATGCGGC TCAGGCCGTC TGCCGCCTGT TAAATGAATA A
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| Protein sequence | MQIVMKLYII AGEKSGDIHG ALLLKNLLRL MPGMEVAGLG GQGMHALCPG VEDWADEAAV
IGVVEVLKKY GWFRRRFLSI LERIRQDQPD CLVLIDYPGF NLRLAERVRK CCPRTRIVYF
ISPQVWAWHR GRIPKMVRML DLMMCIFPFE APLFQEAGLR TEFVGHPLVD EIASIRKEGV
RDPSLVGLFP GSRNREIDRH FPVFIEVVNR LSRERPELSF ETAASTEALA ERMRGMVRKA
GMPPELFHIA VGKYHELMDR AAVGIVASGT ATMEAALHRL PYMLVYKVPL LTYWMARMLI
KIRFIGMVNI LAQKPVVKEL VQFDFTPDKV IDEIERLLVP ENRDVLLEEM KQASDKLGQG
GAAEHAAQAV CRLLNE
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