Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_2036 |
Symbol | |
ID | 6273735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2472372 |
End bp | 2473766 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642614097 |
Product | MATE efflux family protein |
Protein accession | YP_001878627 |
Protein GI | 187736515 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000288761 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0000000485587 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAAGGGA ATAAAAAAAT GAATAAGACG TGGAATTTGA AGGAAATGAA AAAGTTGATA CCGCTGGCCC TTCCGGTGCT GGTGGTCAAC CTCTCCATTG TGGGCATGGG GGCGGTGGAC GCTATTGTGG CCGGGCGCGC CGGCGTGACG GACATGGCCG CCGTGGCCCT GGGGTCTTCC GTGTACCTGC CCGTGGCTCT CTTCGCCTGC GGCGTGTTGA TGATCATCGG CCCCGTAATT GCCAACATGC GGGGGAAAAG CCATGAAAGC CGCGTGGGCT ACATGACCAA CCACGGCCTG TGGCTGGCGT TCATGCTCAG TCTGGTTTCC ATGCCGGTCA TTTATGTGTT GAGAAATGTG TTCGGCTGGA TTTCCGATGA CGCCGCCATG TGCCAGATGG CCTCCGCCTA CATGTTCGCC ATTATGTGGG GCCTTCCCGC CAACCTGGGG TTCGTGGCCC TGAAGAGCCT GAACGAAGGC TCCAACATGA CACGTCCCGC CATGTACGTG GGATTGTGCG GCCTGTTGCT CAACATTCCC CTGAACTACA TGTTCGTCTT TGGCATGTAC GGTTTTCCCC GCATGGGTGG AGCGGGGTGC GGTGCGGCCA CGGCAGTCAT TTTCTACATT GAATTCCTGC TGATGTTCCT GCTGGTTTAC TTCAATCCCA AGCACAGGCC GTACCGCAGG CACATCATTT CCTGGCGGCG GCCTACGCCT TCCGTCATCA CGCACCTGGT GCGGCTGGGC GTGCCTATAG GCGTTTCCCA GCTGTGCGAG GTGATGCTCT TCTGCGCGGC GGCTCTGGTG CTGGCTCCGC TGGGAGAGAC GCAGGTGGCT AGCCACCAGA TTGCCGGGAA CGTGGGCGGC CTGGTGTTCA TGCTCCCGCT TTCCGTAGGG CTGGCGGCTT CCATCCGCGT GGCGTACCAT CACGGCAGGA ATGACCTGGC AGGCACCAGA TCCGCCATTC TGTCTTCCTA TGTGCTGGTG CTCACCATCT GTCTGTGCAC CTTTGGAGGC ATCACCCTGT TCCGCGAGCA GATCGTGCAC CTGTACAATG ACTCGGAGCT GATTGTCAGC ACGGCTTCCG TCCTGCTGGT TCTGGCGGCG GCCTACCAGC TTCCGGACTG TTTGCAGGTG CTTTCCGTCG GGGTTCTGAG AGGATTCCGG GATACGGCGT CCATTACCTT CATTACGTTT TTCTCTTATT GGATGGTAGG ATTTCCGGCG TGCTACATCC TTGCCCGTAC GGACTGGATT GTCCCGGCCA TGGGAGCGCG GGGCATCTGG ACGGGATTCA TCATCGGCCT GGCAGTAGCG GCGGTGCTGC TGCTCTGGCG CGTAAGGCGC ACTACCAGGC GGGAATTTTC CCTGATGAGG CAGGCGGGGG AATAA
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Protein sequence | MEGNKKMNKT WNLKEMKKLI PLALPVLVVN LSIVGMGAVD AIVAGRAGVT DMAAVALGSS VYLPVALFAC GVLMIIGPVI ANMRGKSHES RVGYMTNHGL WLAFMLSLVS MPVIYVLRNV FGWISDDAAM CQMASAYMFA IMWGLPANLG FVALKSLNEG SNMTRPAMYV GLCGLLLNIP LNYMFVFGMY GFPRMGGAGC GAATAVIFYI EFLLMFLLVY FNPKHRPYRR HIISWRRPTP SVITHLVRLG VPIGVSQLCE VMLFCAAALV LAPLGETQVA SHQIAGNVGG LVFMLPLSVG LAASIRVAYH HGRNDLAGTR SAILSSYVLV LTICLCTFGG ITLFREQIVH LYNDSELIVS TASVLLVLAA AYQLPDCLQV LSVGVLRGFR DTASITFITF FSYWMVGFPA CYILARTDWI VPAMGARGIW TGFIIGLAVA AVLLLWRVRR TTRREFSLMR QAGE
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