| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2024 |
|---|
| Symbol | |
|---|
| ID | 6274776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 2457802 |
|---|
| End bp | 2458305 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642614084 |
|---|
| Product | crossover junction endodeoxyribonuclease RuvC |
|---|
| Protein accession | YP_001878615 |
|---|
| Protein GI | 187736503 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
|---|
| TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.000145262 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTC TTGCCATAGA CCCGGCCATC CGCAACACGG GTTATGCCGT GGTGGAGGGG
GATTACCGGC GCGCGCGCGC CCTGGACTAT GGAACGCTAT CCATTCCCCG GAGCGTGTCC
CAGTCCGGCT GCCTGCTTGC CATCAAGCAG CATTTGGGCA ATCTCATTGA CAAATGGAAC
CCGGATGAAA TGGCGGTGGA GCGCATCATC TATGTCCAGT CTCATCAGAC GGCCATCACG
ATGGGTGCGG CCAAGGCGGC CGTGGTCATT GCCGCGGCGG AAGCCGGGCT GCGTATTATG
GAATATTCCC CCAAAAGCGT GAAGCTCTCC GTCGTAGGGC GCGGGGCCGC TCAAAAAACG
CAGGTCGCCT TCATGGTGCG GGCTCTTTTG GAACTCCGGG AAACGCCGGA ATCCGATGCC
GCCGACGCCC TGGCGATCGG CCTCACCCAC CTCTTTTCTG CGGACCCTTT GAAGGCCCAC
ATGATGGAGA GGAAATACAT TTAG
|
|---|
| Protein sequence | MRILAIDPAI RNTGYAVVEG DYRRARALDY GTLSIPRSVS QSGCLLAIKQ HLGNLIDKWN
PDEMAVERII YVQSHQTAIT MGAAKAAVVI AAAEAGLRIM EYSPKSVKLS VVGRGAAQKT
QVAFMVRALL ELRETPESDA ADALAIGLTH LFSADPLKAH MMERKYI
|
|---|
| |