| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2006 |
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| Symbol | |
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| ID | 6274539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2437064 |
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| End bp | 2438134 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642614065 |
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| Product | integrase family protein |
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| Protein accession | YP_001878597 |
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| Protein GI | 187736485 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.162448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATAC CTACTTCCTC TTTCCCAACT GACGCAGACC AGGCCGGAAT CTTCCTCATC
CGTTCCCTGG GCATTCCGCC CATGGACGCT TTCCTTCTTT TAAAGGATCT CCTGGACACC
AGCCGCGGAA GAGGCGACAG AATAACCCGG GCCAAACGCT GCATACGGCT GGGAGGAGAG
GCTCTTGCCG ACAGGGAAAA AAGCGTATCG TTTTCCCAGG CTGTCCGCGC CAGCCTGGAA
GCAAGGAAAC ACCGCCGTCC CCGCACGCTG CAGGAAATCC GCTATATGGC CGCCCGGATG
ATGAAAAAAT GCCCGGAGCT GGCAAGGAAA CAGGTCCGTT CCATCACTCC GGAAGATTGC
GGGCGTTATC TCCGCAAAAG CTTTCCCACT CCCCGCCAGC GGCACAAGGG GCGGCTGATC
CTGAGCGGCA TCCTGAATTA TTCCCTGAAG CGCGGATGGT GCCGCAGAAA CGCGGCCTTT
CTGGTTCCTC CCCCCATCCT CAGGGAAAAA CGCATCAGGG CCCTTTCCCT GTACGAGGCA
AAGCGGCTTC TCCACACTGC GGAACAGTTG TTCCGAGGGG AATGCCTGCC GGCCTGCGCC
CTGATGCTGT ACGCGGGTAT ACGCCCCCAC GAGGTCAAAA GGCTGACGTG GAAGCATATC
AATCTGAAAT CCGGCCTGGT TTCACTGGCG CCCACCCATA CCAAAACGGG AGGGAGCCGC
CATGTTTCCA TCCTTCCCGT GCTGGGTTCC ATCCTCAGCC GGATGTCTTC CGCCGGTTCC
CCCGCCCGTT CCGTCTGCCC GCCCAACTGG GAAAAGAAAT GGAAGGAAGT AAGGCGCCGG
TCCGGCATCC TGAAGAAAAG CGGATGGGTT CAGGACGTGC TGAGGCATAC CTACGCCTCC
TACCACCTGG CCCATTTCTG CAATCAAAAC CTTCTCCAGA AGGAGATGGG ACACTCCTCC
CCCTCCCTGC TGCTGGCCCG CTATCTTAAT ATGGAGGGCA TCACCTCCGC AACCGGCGCC
ATGTTCTGGA CGCACAGCTT TGTTTCTCCC GCTCCGTTAA AGGAAGACTG A
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| Protein sequence | MNIPTSSFPT DADQAGIFLI RSLGIPPMDA FLLLKDLLDT SRGRGDRITR AKRCIRLGGE
ALADREKSVS FSQAVRASLE ARKHRRPRTL QEIRYMAARM MKKCPELARK QVRSITPEDC
GRYLRKSFPT PRQRHKGRLI LSGILNYSLK RGWCRRNAAF LVPPPILREK RIRALSLYEA
KRLLHTAEQL FRGECLPACA LMLYAGIRPH EVKRLTWKHI NLKSGLVSLA PTHTKTGGSR
HVSILPVLGS ILSRMSSAGS PARSVCPPNW EKKWKEVRRR SGILKKSGWV QDVLRHTYAS
YHLAHFCNQN LLQKEMGHSS PSLLLARYLN MEGITSATGA MFWTHSFVSP APLKED
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