Gene Amuc_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1996 
Symbol 
ID6274627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2424208 
End bp2424801 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content60% 
IMG OID642614056 
Producthypothetical protein 
Protein accessionYP_001878588 
Protein GI187736476 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.242655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ACTGGAAATT GATTCAACAG CACCTGAGCG TGGATGCGGA CGGCATCCCC 
GGCCCCAAGA CGGCGCTGGC CCTGCTGGAC AGGCTGGGCA TCCGCCAACC GGAACAATCC
TGGCCCAGCC AGGAGGAAGT GCGCTCCGGG AAATCCGTCT TCGGCCGTGC GGGTGATGAA
AGCAACATGA CCAGCATCAA GCTGCCTTAT ATCATGCGGC TGGCGTGGGA AACAAACACG
ACCGTTTCCA CCATGCGCTG CCACAAGCTG GTGGCGGAAC CGCTCGTCCG CATCTTCCAG
GCTACTCTGG ACCATTACGG CATGGAGAAA ATCAGGGAAC TGGGGCTGGA CCTGTACGGC
GGCTGCTTCA ACAACCGCTC CATCATCGGC GGAAAGGCCA CATCCATGCA CGCCTGGGGA
ATCGCCGTGG ACATAGACCC GGACAGAAAC GGCCTGAACA TCCCCGCGCC GAAAGCGGTA
TTGTCCGGAC CGGAGTACGC CGCCTTCTGG CAATTCGTGG AAGCGGAGGG GGCCGTATCC
CTGGGACGCT CCCGCGACTA CGACTGGATG CACTTCCAGT TCTCTACTCT TTGA
 
Protein sequence
MKKYWKLIQQ HLSVDADGIP GPKTALALLD RLGIRQPEQS WPSQEEVRSG KSVFGRAGDE 
SNMTSIKLPY IMRLAWETNT TVSTMRCHKL VAEPLVRIFQ ATLDHYGMEK IRELGLDLYG
GCFNNRSIIG GKATSMHAWG IAVDIDPDRN GLNIPAPKAV LSGPEYAAFW QFVEAEGAVS
LGRSRDYDWM HFQFSTL