Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1963 |
Symbol | |
ID | 6275006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 2382199 |
End bp | 2382702 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642614024 |
Product | hypothetical protein |
Protein accession | YP_001878557 |
Protein GI | 187736445 |
COG category | [S] Function unknown |
COG ID | [COG3610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0436579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.000913146 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCCGG ATCTTATTTC CTCCATCCTT CTGGACGGGC TGATGGCCGC CATTGCCGCC ACGGGATTTG CCGTCATCTC CAATCCGCCC AGGCGCGCCA TTGCCGTTTC CGCCGTTCTG GCGGCCGTCG GCCACGCTTT CCGCTTTTAC ATGCTGCACT CCTGGACCAT TGACATTTCC AGCGCCACCT TCATTGCCGC CTTCACCATA GGCATGCTGG GCGTCATGAC GGCCAAGCTG GTGAAGTGCC CGGCGGAAAT ATTCGCTTTC CCTTCCCTGC TTCCCATGAT TCCCGGCGTG TACGCCTATA AGACCATCCT GGCCCTGATG CAGTTTATGC AGGAGAACCA GGACGCGGCC GTCATGAACC GTCTGATTGT GGACATCTGC AAAAACGGCA TCACCGCCTT CTTCATCATC TTTTCGCTGG TTATCGGAGT AGCCATACCC ATGCTGATGT TCAAACGGTT GAGCTATACA CGCATCATCA AGCCGGGGCA TTGA
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Protein sequence | MNPDLISSIL LDGLMAAIAA TGFAVISNPP RRAIAVSAVL AAVGHAFRFY MLHSWTIDIS SATFIAAFTI GMLGVMTAKL VKCPAEIFAF PSLLPMIPGV YAYKTILALM QFMQENQDAA VMNRLIVDIC KNGITAFFII FSLVIGVAIP MLMFKRLSYT RIIKPGH
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