| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1956 |
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| Symbol | |
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| ID | 6275054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2372212 |
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| End bp | 2372706 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642614016 |
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| Product | ybaK/ebsC protein |
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| Protein accession | YP_001878550 |
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| Protein GI | 187736438 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2606] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00011] ybaK/ebsC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.145688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.00991863 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCCAAAA AGAAGGAGGC AAAGACAAAT GCTATGCGCC TGCTGGATGC GCTGCATATC
CCGTACAGGC ATTATTCCTA TGAATGCCGC GAGTTTGTGG ATGCGCGGCA TACGGCGGAA
GCACTGAACC TGGCGGAGGA GAAGATGTAC AAGACGCTGG TAACGGAGGG AGCTCCTCGG
CAGTATTACG TGTTCGTGAT ACCCATAGGC GCGGAGCTTT CCTTGAAAAA GGCTGCCCGC
ACCGTGGGAG AAAAGGCTCT TTCCATGCTT CCGGTGAAGG ATATTACCGC CGTGACGGGG
TACGTGCGCG GCGGCTGCAC GGCTTTGGGG ATGAAAAGGA AATACCCTAC GGTGATTGAT
GCCAGCGCGG AAGCCCTGCC GGAGATGGTG GTGAGCGGCG GACGTCTGGG GTGCCAGATT
GAATTGAATC CTGTGGATTT ATGCCGTGCG GCGGAGGGCT TTTTTGCGGA TGTGGCGGAT
ATTTCCGTTT CATGA
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| Protein sequence | MSKKKEAKTN AMRLLDALHI PYRHYSYECR EFVDARHTAE ALNLAEEKMY KTLVTEGAPR
QYYVFVIPIG AELSLKKAAR TVGEKALSML PVKDITAVTG YVRGGCTALG MKRKYPTVID
ASAEALPEMV VSGGRLGCQI ELNPVDLCRA AEGFFADVAD ISVS
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