| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1947 |
|---|
| Symbol | |
|---|
| ID | 6275132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2365259 |
|---|
| End bp | 2366440 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642614007 |
|---|
| Product | N-acylglucosamine 2-epimerase |
|---|
| Protein accession | YP_001878541 |
|---|
| Protein GI | 187736429 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.904714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.0967574 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAA CTCTTGATAT GCCCTCTTTG GGCAAGTTCT ACCGCCGCCA GCTTCTGGAA
GACGTTCTGC CGTTCTGGTT CCCCCGCGCC TACGACGAAA AAAACGGTGG TCTTTACCAC
TGCTTTGACG CAGACGGCAC GCTGGTGGAC TCCGACAAAT CCGTCTGGGC CCAGGGCCGC
ATGGCATGGA TGCTGCTGAC AATGTACAAC AGCATCGAAA AGAATACGGA CTGGCTCAAA
TGGGCGGAAA GCGCCTTGGA ATTCCTGAAA ACCAAGTGCG TTGACCCGGC GGACGGCCGC
ATGTTCTTTC ATGTGGCTGC CGACGGCACC CCCATCCGCA AACGCCGCTA CGCCTACAGC
GAATCTTTCG CCGCCATCGC CTTTGCAGCG CACGCCAGGG CGACCGGCAG CCGGGATTCC
GCCCGTGAAG CCCGCCACTG GTTCGACATC TTCACGGACA ACTGCTTCAC TCCCGGCAAA
ATGGTTCCCA AATTCACCGG GGAACGCCCT ACGACCGGTC TGGGCACCCG CATGATTACC
CTGAACACAG CTCAGGAAAT GCGCAAGTAC CTGGAAGATG ACGACGGCTT CTATACCGGC
TGGACAGACC GCTGCATCAA CGACCTCCGC ACCCTGTTCA TGAAACCTGA CATCCAGGCA
GTCATGGAAG TGGTGGGAAC GGACGGTTCC ATCATCGACC ACTTCGACGA ACGCACCCTG
AACCCCGGCC ACACTACGGA GGGTGGGTGG TTCGTGCTGG AAGAAGCCCG CCATCGCGGC
AATGACCCCG AACTCATCAA GGTGGGCTGC GACATGATCG ACTGGGCATT CGCCCGCGGC
TGGGACAAGG AAAACGGCGG CATGCTGTAC TACACGGACG TGTACAACAA GCCCGTTCAG
GAATACTGGC ACAACATGAA GTTCTGGTGG CCGCATGATG AAGCGCTCAT CGCCATGACG
CTCGCCTACA AGCTCACAGG GGAAGAACGC TATGCCATCC GTCACGACAT GGTGCGCAAC
TGGGCTTTCT CCCACTTCCA GGACGTTCAG CATGGCGACT GGTTCGGCTA TCTGAACAAG
GACGGTTCCA GGGCTAACAC CCTCAAGGGG AGCCTCTGGA AATCCTTCTT CCACCATCCC
CGCGCCATGT GGTGCTGCGC CCACTACTGC GGCGCCATTT AA
|
|---|
| Protein sequence | MAATLDMPSL GKFYRRQLLE DVLPFWFPRA YDEKNGGLYH CFDADGTLVD SDKSVWAQGR
MAWMLLTMYN SIEKNTDWLK WAESALEFLK TKCVDPADGR MFFHVAADGT PIRKRRYAYS
ESFAAIAFAA HARATGSRDS AREARHWFDI FTDNCFTPGK MVPKFTGERP TTGLGTRMIT
LNTAQEMRKY LEDDDGFYTG WTDRCINDLR TLFMKPDIQA VMEVVGTDGS IIDHFDERTL
NPGHTTEGGW FVLEEARHRG NDPELIKVGC DMIDWAFARG WDKENGGMLY YTDVYNKPVQ
EYWHNMKFWW PHDEALIAMT LAYKLTGEER YAIRHDMVRN WAFSHFQDVQ HGDWFGYLNK
DGSRANTLKG SLWKSFFHHP RAMWCCAHYC GAI
|
|---|
| |