| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1940 |
|---|
| Symbol | |
|---|
| ID | 6275182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 2354996 |
|---|
| End bp | 2355451 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642614000 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001878534 |
|---|
| Protein GI | 187736422 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5465] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.473224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.0765452 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACC AGCATCTCAG CCTTTTGGAC CGTGTGTACA CCGTTCTCAG AAAGAGAGGG
GAAGAAACGG AATGGATTAC TTCCGCTGAT GACCACAACA TTAAGACAGG CATCGCATTC
GTCCCCTGTG ATACGTTCAC CCCGGTGAGC CTCCTGTACA CCATGATTGA ACGTCCGGAG
ACGCTGGTCA TTGACGTGCT TTTTGCCGCC AAGGTTCCTG AAAACCGCCG TGTGGAAATC
AGCATTATCC TCAGCGAACT GAACGCGGAC CAGACGGCCG GCGCCTTTCA GCTGGACCCC
AACAGCGGGT ATGTTTATTA CCGTCAGTCC TTCGTTCTGG AAGGCATGGA CCTCACGGAA
GCCCAGTTTG CCCAGTTGAT GAAGAATATT GAAACCGTGG CTGTGGAAAC GGCGGAGGCC
TATTCTCACA TCATGGAGAC GGAATATCCC AAATAA
|
|---|
| Protein sequence | MENQHLSLLD RVYTVLRKRG EETEWITSAD DHNIKTGIAF VPCDTFTPVS LLYTMIERPE
TLVIDVLFAA KVPENRRVEI SIILSELNAD QTAGAFQLDP NSGYVYYRQS FVLEGMDLTE
AQFAQLMKNI ETVAVETAEA YSHIMETEYP K
|
|---|
| |