| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1804 |
|---|
| Symbol | |
|---|
| ID | 6274425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2191941 |
|---|
| End bp | 2192477 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642613868 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001878403 |
|---|
| Protein GI | 187736291 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0716] Flavodoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.348103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.0122545 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGAG CCGGATGTTT GGGACAGGAA CAACCCAAGG TTTCCGCGGA ACCTTCCAGG
GTCCTCATTG CCTATTATTC ATGGGGAGGC AATACGAAGT ACGCCGCTGC GCAAATTCAG
AGGGCGACGG GAGGAACGCT GTTTGAAATC AAGCCGGTCA AGCCCTATCC CTCCGAATAC
CGGGAATGCA CCGTGCAGGC CAGGAAGGAG ATTCAGGAAG GGGTTCGGCC GGAACTGGCC
GCCAAAGTGG AGGATATGGG CAAGTATGAT GTGATTTTCA TCGGCAGCCC CAACTGGTGG
AGTACCATTG CGCCTCCGGT CGCGTCTTTC CTGGCAAGTT ACGACCTTTC CGGCAAGACG
GTGATTCCAT TTGTGACGCA TGGGGGCGGC GGCATGGCGC GCTGTGCGGA CGAGGTTCGG
AAGCTGTGTC CCAAGTCCAC CGTTCTCAAG GGAGGCGCTT TTGCCGGGGA AGGAATCCGG
ACGACGAGGG CCGCGCTTGT CAAGTGGGTC AATGAGACGA TTTCCATCAA TAAATAA
|
|---|
| Protein sequence | MTGAGCLGQE QPKVSAEPSR VLIAYYSWGG NTKYAAAQIQ RATGGTLFEI KPVKPYPSEY
RECTVQARKE IQEGVRPELA AKVEDMGKYD VIFIGSPNWW STIAPPVASF LASYDLSGKT
VIPFVTHGGG GMARCADEVR KLCPKSTVLK GGAFAGEGIR TTRAALVKWV NETISINK
|
|---|
| |