| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1747 |
|---|
| Symbol | |
|---|
| ID | 6274647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2126764 |
|---|
| End bp | 2128119 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642613810 |
|---|
| Product | cytidyltransferase-related domain protein |
|---|
| Protein accession | YP_001878346 |
|---|
| Protein GI | 187736234 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0615] Cytidylyltransferase
[COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR01518] glycerol-3-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGG TTATTACTTA CGGAACCTTT GATTTGCTGC ACACGGGGCA CGTGAATCTG
CTGAAGAGAG CCCGGAAACT GGGGGACCGG CTCATCGTCG GCGTGACTAC GGACAGTTAC
GACCAGAGCC GCGGCAAGCT GAATGTCATG GAGAGCCTGG AGGAACGCAT GGAAAATGTG
CGGAAAACCG GTCTGGCGGA TCTCATTATT AAGGAAGAAC TAGAAGGGCA GAAGATTCAT
GACATACGGA AGTACGGGGC GGATGTTTTT GTGATTGGCT CCGACTGGTC GGGGAAATTT
GACTATCTTC GCGATTATTG TGAGGTGGTT TACCTGGAAC GCACCAAGGG CGTTTCTTCA
ACAGACCTCC GTTCCGCCCG GAATCCCATT GTATATATGG GAATTGCAGG TCACGGGCGC
ATAGCGGGCC GTTTTCTCCG GGAGTCCAAA TATGTCAGCA ATATTGAAAT AACAGCCGTT
TTCGGAAGGA ATGAGGAGAA AGTCCGCCGT TTTGCAGAGT TCCACGCTCT GCTGGAATAT
TATACGGAAT ACGAACAGTT TCTGGACCGG GTTCATGCCG TTTATATTGC CGTCCCCCAT
CATCTCCATT ATGAAATGGC CAGGAGGGCC CTGTTGCGGG GGAAGCATGT ATTGTGCGAG
AAGCCTCTTG CCCTTGCCCG GGAGGAGGCG GAAGAGCTGT TCCGGCTGGC CGAAGAGAAA
GGAGTCGTTT TGCTGGAAGC CCTTAAAACT GCGTTTTGTC CGGCTTTCCA GCAACTGACC
AGTTTGGCGG GGAGCGGCAT TATTGGTTCC ATCAAGGCGG TGGACGCCAC GTTTACCAAG
CTGATAGAGG ATGAGGCTGC CAGGGAGTAT GACCCCATGC AGGCCGGAGG CGCCTGGACG
GAACTGGGTT CCTATCCCGC CTTTGTCATT GGGAAGCTTC TGGGAACCGA GCCCCGCAGG
ATTCGTTTTG TTACTTGCAG AAAGCCTCAT ACGGGCGTGG ACGTGTTCAC GCGCGCGGAA
TTTCTTTATT CCAATGCAGT AGCCACCGCC ACGGCAGCCA TAGGAGCCAA GCAGGAAGGG
GACTTGTGCA TTACCGGAAC GGAGGGGTAT ATTTATGTGC CGGCGCCTTG GTGGAAGACG
GAGATGTTTG AAGTGCGGTT TGAGGATGCC CGGCTCAACA GGAAATATTT TGCCAATTTT
GAAGGGGATG GGCTGCGTTA TGAACTTGGC GCGTTTTTGC GCCTGATTCA TGGCTGCCAG
CACGGCAACC GTCTTTTGAC CCGTGAGGAT TCCGTGTTCA TGGCTGATGT TGCCTCCCGT
TTCAGGAGAG GGTATTGCGT GGAAGAGATC AGTTAG
|
|---|
| Protein sequence | MKTVITYGTF DLLHTGHVNL LKRARKLGDR LIVGVTTDSY DQSRGKLNVM ESLEERMENV
RKTGLADLII KEELEGQKIH DIRKYGADVF VIGSDWSGKF DYLRDYCEVV YLERTKGVSS
TDLRSARNPI VYMGIAGHGR IAGRFLRESK YVSNIEITAV FGRNEEKVRR FAEFHALLEY
YTEYEQFLDR VHAVYIAVPH HLHYEMARRA LLRGKHVLCE KPLALAREEA EELFRLAEEK
GVVLLEALKT AFCPAFQQLT SLAGSGIIGS IKAVDATFTK LIEDEAAREY DPMQAGGAWT
ELGSYPAFVI GKLLGTEPRR IRFVTCRKPH TGVDVFTRAE FLYSNAVATA TAAIGAKQEG
DLCITGTEGY IYVPAPWWKT EMFEVRFEDA RLNRKYFANF EGDGLRYELG AFLRLIHGCQ
HGNRLLTRED SVFMADVASR FRRGYCVEEI S
|
|---|
| |