| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1719 |
|---|
| Symbol | |
|---|
| ID | 6274078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 2089829 |
|---|
| End bp | 2091193 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642613782 |
|---|
| Product | exodeoxyribonuclease VII, large subunit |
|---|
| Protein accession | YP_001878318 |
|---|
| Protein GI | 187736206 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1570] Exonuclease VII, large subunit |
|---|
| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.623668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0000296907 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCC CGGAGGAAAC GCCCGCCGCG CCCAAACCCA TCACAGTCAA ACAGCTCGTT
TACCGCCTGA GGGACACGGT CAGCATCGCT ATGGGCACCC AGTGGGTGGT GGGAGAACTG
AGTAACGTCA AGCATCACAC CAGCGGCCAC GTTTATTTCA CCCTGAAGGA ACAGGGAGCG
GAAATTTTCT GCGCCTTTTT CAAGGCAGCG GCTTCCAAAT GCCCCATACG GCTCCAGGAA
GGGATGAAAG TCCATGTCCT GGGCAGCGCC ACCGTATACC CGGACCGGGG GCAACTCCAG
CTGGTCATCA GGCAGGTAAA AGCTGCAGGA CAGGGAGATT TGCAGACTCG CTTTTTGGAG
TTGAAAGCCA AACTCCAGCG CGAGGGGTTG TTTGATGCGG AACACAAAAA GAAAATTCCC
ACGTTCCCCC GCGCCATCGG CATCGTCACC TCCCCCACCG GCGCCGTCAT CCAGGACATG
CGGCACGTAT TGGAACGCCG CGCCCCGTGG GTGAAGGCTT ATCTGCTGCC CATACGCGTG
CAGGGGGCAG GAGCGGAGCA CGAAATAGCC GCAGCCGTGC GCGCTTGGTC CGGAGCCCCC
TTTAACGGTC TCCCTCCCGT GGACGTGCTC ATTGTAGGCC GCGGCGGCGG CTCCATTGAG
GATTTGTGGA ATTTCAATGA GGAAACGGTG GCGCGCGCCA TTTACGAATG TACCGTTCCC
GTGATTTCCG CAGTGGGTCA TGATACGGAC TTCACCATTG CCGATTTTGT AGCGGATCTG
CGCGCTCCCA CTCCCACTGC AGCCGCGGAA CTGGCCACAC CGGACGGCCC CGAATGGCTC
CGCAAGCTGT CCAGAATGGA ACAGGCTCTT CATGCATCCG CTCGGCATTC CCTCTTGCGT
TCCAAGCTGA AACTGGATGT TTACCTGCGA GGGAAACTGT TGGATGCGTA TTCCCTGCTC
TCTCCTTATT CTCAGCGCCT GGACGATATG GAAGAAACTC TGCAGAATGC CGCAACCACG
AGAATTTTTC ATAATGCGCT GCATATTAAC AAATTGGAAC ATCAACTGCA AATGCGCCAT
CCCGCCCACA GGAACCGGGA GCGTACACAG CTTCTGGCTT CCCTTCAGGC CGGTTTATCC
CATGCTGCCG CCGCCCGCAT GACGGATTTA TCTTCACAAC TCACTCTTAT TCAAGCACGT
CTTGAAGCAC ACAGCCCGGA ACAGACCCTG CGCCGCGGAT ATGCCCTGGT GGAAAACCAG
GATAAGCAGC TTATCCGGCA GACAAACCAG GTGCATGCAG GGGAAAAATT GAAAATCCGT
GTTTCCGACG GTTGTTTTTA TGTCAGGGAT GACACGCCAC AATAA
|
|---|
| Protein sequence | MEFPEETPAA PKPITVKQLV YRLRDTVSIA MGTQWVVGEL SNVKHHTSGH VYFTLKEQGA
EIFCAFFKAA ASKCPIRLQE GMKVHVLGSA TVYPDRGQLQ LVIRQVKAAG QGDLQTRFLE
LKAKLQREGL FDAEHKKKIP TFPRAIGIVT SPTGAVIQDM RHVLERRAPW VKAYLLPIRV
QGAGAEHEIA AAVRAWSGAP FNGLPPVDVL IVGRGGGSIE DLWNFNEETV ARAIYECTVP
VISAVGHDTD FTIADFVADL RAPTPTAAAE LATPDGPEWL RKLSRMEQAL HASARHSLLR
SKLKLDVYLR GKLLDAYSLL SPYSQRLDDM EETLQNAATT RIFHNALHIN KLEHQLQMRH
PAHRNRERTQ LLASLQAGLS HAAAARMTDL SSQLTLIQAR LEAHSPEQTL RRGYALVENQ
DKQLIRQTNQ VHAGEKLKIR VSDGCFYVRD DTPQ
|
|---|
| |