| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1700 |
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| Symbol | |
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| ID | 6274086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2065567 |
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| End bp | 2066790 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642613759 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001878299 |
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| Protein GI | 187736187 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.605674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0000000413571 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCTCC ATACTTATTT ACGCAATTTT CCAGACGCCC AGGGCCGTTT TGGCGAATAC
GGCGGCGTTT ACCTGCCGGA CGAGCTGGTT CCCGCTTTTG AAGAAATTAC GGAAGCCTAC
CAGACGATAG CCCACTCCGC CCAGTTCATT AATGAATTGC GGCGCATCCG CAAACAGTTT
CAGGGACGTC CCACCCCAGT TTACCACTGC GAACGCCTTT CCCGCCACCT GGGCACCTCT
CAAATTTACC TGAAGAGGGA AGATTTGAAC CATACAGGCG CCCATAAGCT CAACCATTGC
ATGGGGGAAG GCCTTCTGGC CAAATACATG GGCAAGAAGC GCATTATCGC GGAAACGGGC
GCAGGACAGC ATGGCGTGGC GCTGGCTACA GCCGCCGCCT TCTTCGGCCT GGAATGCGAA
ATTCACATGG GAGCGGTAGA TATTGCCAAG CAGGCTCCGA ATGTCACCCG CATGAAAATC
CTGGGTGCCA AGGTGGTTCC TGTCACGCAC GGCCTCCAAA GCTTGAAGGA AGCTGTGGAT
TCCGCCTTTG AATCTTACCT GAACAGTTAT CAGGATTCCA TTTACTGCAT CGGTTCCGTG
GTAGGCCCCC ACCCTTTCCC GCAAATGGTG CGCGATTTCC AAATGTGCAT CGGCGTGGAA
GCCCGGGAAC AATTCCTGGA AATGACGGGA CTTCTGCCGG ACGCCGTCTG CGCCTGCGTG
GGCGGCGGCA GCAATTCCAT GGGCATGTTT ACCGCCTTCC TGGGAGACCC GCTGGATATC
TATGGCGTAG AACCCCTCGG CAAAGGTCCC AGGCTTGGGG ATCATTCCGC CTCCATCACC
TATGGACGCA AGGGCGTCCT GCACGGTTTT GAAAGCATCA TGCTCCAGGA TGAAGACGGT
AATCCGGGAC CGGTTCATTC CGTAGCCAGC GGCCTGGATT ATCCTTCCGT AGGGCCGGAA
CACGCCTATC TGCACGACAT CGGCCGCGTT AACTATGTCA CCGCCACAGA CGAGGAAGCC
GTGGACGCCT TCTTCAAACT TTCCCGTTAC GAGGGGATCA TTCCCGCTCT GGAAAGCTCC
CACGCTATCG CGTATGCCAT GAAGTGGGCA CGGGAAAACA GAGGAGGCGC CATTCTGGTA
AACTGCTCCG GCCGCGGAGA CAAGGATGTG GATTACGTCG TGGAGCATTA CGGCTATGGG
GAAGACCACC AGTTCCCCGC CTGA
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| Protein sequence | MDLHTYLRNF PDAQGRFGEY GGVYLPDELV PAFEEITEAY QTIAHSAQFI NELRRIRKQF
QGRPTPVYHC ERLSRHLGTS QIYLKREDLN HTGAHKLNHC MGEGLLAKYM GKKRIIAETG
AGQHGVALAT AAAFFGLECE IHMGAVDIAK QAPNVTRMKI LGAKVVPVTH GLQSLKEAVD
SAFESYLNSY QDSIYCIGSV VGPHPFPQMV RDFQMCIGVE AREQFLEMTG LLPDAVCACV
GGGSNSMGMF TAFLGDPLDI YGVEPLGKGP RLGDHSASIT YGRKGVLHGF ESIMLQDEDG
NPGPVHSVAS GLDYPSVGPE HAYLHDIGRV NYVTATDEEA VDAFFKLSRY EGIIPALESS
HAIAYAMKWA RENRGGAILV NCSGRGDKDV DYVVEHYGYG EDHQFPA
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