| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1668 |
|---|
| Symbol | |
|---|
| ID | 6274615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 2020324 |
|---|
| End bp | 2021715 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642613726 |
|---|
| Product | AAA ATPase central domain protein |
|---|
| Protein accession | YP_001878267 |
|---|
| Protein GI | 187736155 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0287351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.641434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGGCA TCATGAAAAA AGACGACATC CCGGGCCTGT TCTCCGCCTT GGCGGACCGC
CCTCTGGCGG ACCGCCTGAG GCCGTCCGCA CTGGAAGACA TCATGGGCCA GGATCATCTG
CTGGGGGAAG GAGGACCTCT CCGGCTCATG GCGGACTCCG GCAAGATGAC CAGCTTTATC
CTATGGGGGC CGCCCGGCTG CGGGAAAACC ACGCTGGCGC GCATTCTGGC GACGCGCACA
TCCATGCATT TCGCAGCTCT CTCCGCCGTC TTCTCCGGCA TGGCGGATTT GAGAAAAGCC
TTTGACGAAG CGGCCAGGCG CAGGGAATAC GGCCATGGGA CCCTCCTGTT CGTGGATGAA
ATACATCGGT TCAACCGCGC CCAGCAGGAC GGTTTTCTGC CATATGTGGA AAACGGAACC
GTTACGCTGG TGGGGGCCAC TACGGAAAAC CCCTCCTTTG AACTGAACAG CGCCCTCCTC
TCCCGCTGCA AAGTCTTCGT CATGCACTCC CTGGACGCCC CGGCTCTGGA AAGCATCATT
GAACGGGCGG AAACCCTTCT TCAGCGTGAA CTGCCGCTCG CGCCGGAAGC GCGCGCCACC
CTGATAGAAC TGGCAGACGG AGACGGCCGC TACCTCATTA ACCTGATGGA AAGCGTCTTT
GACCTCTGCA AGCCCGATGA AATGCTGGGC ACGGACGCAC TGCTGAAAAT TGTCCAGCAG
CGAGCCCCGG TTTACGACAA GGACCGGGAA GGCCATTACA ATCTCATCAG CGCCCTGCAT
AAATCCCTGC GGGGGTCGGA TACGGACGCA GCCCTGTACT GGGCCGCACG CATGCTCGAG
GGCGGGGAGG ATCCTCTCTA CCTCCTGCGC CGCCTGACCC GCTTCGCCAT GGAGGATATC
AGTCTGGCGG ACCCTGCCGC ACTTCAAATG GCCATTGCCG CGTGGGACGC CTATGAACGC
CTGGGCTCTC CGGAAGGAGA GCTGGCGATT GCTGAACTGA TTATCTACCT GGGCTGCGCC
CCCAAATCCA ACAGTGCCTA CACCGCGTGG GGAGCGGCAC GGAAAGCGGC ACGGGAATAC
GGGTCCCTGA TGCCCCCGGC ACACATCCTC AACGCGCCCA CCAAACTAAT GAAGGAACTG
GGCTATGGAA AGAATTACGC ATACGATCAT GACGCGCCGG ACGCTTTCTC CGGGCAAAAC
TACTTTCCGG ACAACATGCC CCGCCGCCAG TTCTACAGGC CGCCGGAACG GGGTTTTGAA
CGGGAAATCA ACAAACGCCT GGCCTATTGG GACAAACTGC GCCGCCAGCG GGCGGAAGAG
GACGCCGGAA ACTCCGGTAC GCGCAGTAAC AGAAAAAAGC CTCCTGTTCC GGAAAAACGG
GATCCCTCAT GA
|
|---|
| Protein sequence | MMGIMKKDDI PGLFSALADR PLADRLRPSA LEDIMGQDHL LGEGGPLRLM ADSGKMTSFI
LWGPPGCGKT TLARILATRT SMHFAALSAV FSGMADLRKA FDEAARRREY GHGTLLFVDE
IHRFNRAQQD GFLPYVENGT VTLVGATTEN PSFELNSALL SRCKVFVMHS LDAPALESII
ERAETLLQRE LPLAPEARAT LIELADGDGR YLINLMESVF DLCKPDEMLG TDALLKIVQQ
RAPVYDKDRE GHYNLISALH KSLRGSDTDA ALYWAARMLE GGEDPLYLLR RLTRFAMEDI
SLADPAALQM AIAAWDAYER LGSPEGELAI AELIIYLGCA PKSNSAYTAW GAARKAAREY
GSLMPPAHIL NAPTKLMKEL GYGKNYAYDH DAPDAFSGQN YFPDNMPRRQ FYRPPERGFE
REINKRLAYW DKLRRQRAEE DAGNSGTRSN RKKPPVPEKR DPS
|
|---|
| |