| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1506 |
|---|
| Symbol | |
|---|
| ID | 6275682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 1798800 |
|---|
| End bp | 1799210 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642613565 |
|---|
| Product | ribosomal protein L17 |
|---|
| Protein accession | YP_001878108 |
|---|
| Protein GI | 187735996 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0203] Ribosomal protein L17 |
|---|
| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.000952918 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGACACG GTGTAAAAAC CTCCAAGCTT CAGCGCAATG CTTCTCACCG CAGGGCTCTG
CTCGCCAACC AGGCATGCAG CCTCATCCTC AATGGACGCA TCACCACCAC CCTGGCCAAG
GCCAAGGCCC TGCGCCCCTA TGTGGAAAAG CTGATTACGC TTGCCAAGCG CGGTGACGTG
CATTCCCGCC GCCTGGCTAC CGCTACCATT CATAATACGA CCGCCGTTAA GCGGCTGTTT
GATGAAATCG CTCCTCTTTG CGCGGAACGC AAGGGCGGCT ATACCCGCAT CGTCAAGCTG
GGCCAGCGTC TGACTGATTC CGCCCTTGTG GCCATGATCG AAATTATCGA TCTGCCCCGT
GAGGCTGCCG AAAAGGAAGA AGCTCCCGCC ACCACGGAAG CCACCGCCTA A
|
|---|
| Protein sequence | MRHGVKTSKL QRNASHRRAL LANQACSLIL NGRITTTLAK AKALRPYVEK LITLAKRGDV
HSRRLATATI HNTTAVKRLF DEIAPLCAER KGGYTRIVKL GQRLTDSALV AMIEIIDLPR
EAAEKEEAPA TTEATA
|
|---|
| |