| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1487 |
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| Symbol | avtA |
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| ID | 6274475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1776879 |
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| End bp | 1778153 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613547 |
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| Product | valine--pyruvate transaminase |
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| Protein accession | YP_001878090 |
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| Protein GI | 187735978 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.41369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAAT TATCGGAGAT CGGAGGCCAT CTGACGGCCA GAACGGGTAT TGATGATTTG
ATGGAGGATT TGTTCAAGGC CCTCCATTCG GGAGACGCCG GCCTGTGCCA GTTGAACGGC
GGGAGCCCCG CCGTTATTCC TGAGGTGACG GAACTTTGGC GGCGCAGCAT GGGGGAACTG
GTGCGAAATG GCAAATTTGA CGTGCTGGTG GGCCATTATG CCCATCCGGG CGGGGATCCT
GCCTTTATCC GTGCCCTGGT GTGTTTTCTC AATGAACGTT GCGGATGGAA CCTGACGCCG
GAAAATGTGG CGATTACCCA GGGTGGCCAG ATGGCCTGCT TTACACTGTT CAACATGCTG
GCGGGCCCGT GCCCGGACGG TGCTGTGCGT GAAATCCTTT TTCCCCTGTG CCCGGATTAT
GTGGGATACC AGTCCCAATC CCTGTGCGGC GGCGTCATGT TCCGGGGCAT CCGGCCCGGC
ATCCGCATGC TGGACGGGCA CACGTTCAAG TACGTGATTG ATTTTGACCG TCTGGACATA
CGTCCGGAAA CGGCCGCCGT CTGCATGTCC CGGCCTACGA ATCCCACCGG GAACGTGGTG
ACGGATGAGG AATTGGGGCT TCTGCGGGAA ATGACTTCCC GCGCCGGGGT TCCCCTGATG
ATTGACAATG CTTACGGGCC TCCGTTGCCC AATATTTGTT TTGTGCCCGT AACCCCGGCC
TGGGATGAGA ACATGATCCT GACCATGAGC CTGTCCAAGA TCGGGTTGCC CGGAACGCGC
ACCGGCATTG TCATTGCGCG CCCGGAGATC ATTCGTGCCG TCGTGAGCAT GGTGACTACG
TCATCCCTGT GCCCGAACAA TCTGGGCCAG GCTCTGGTGA CGCCTTATCT GGAAGACGGC
ACTCTGGAGA GAGTCTGCCG TGAAACCCTC ACGCCGTTTT ACCGCGGCCG GGCGGAATTC
GCCCTGTCCC TGCTGCCGAA ACTTTTCGGA GAATCCATCC CCTGGCGCGT TCATAAGAGT
GAGGGCGCCA TGTTCCTGTG GCTGTGGTTT GAGGGATTGC CCATCACGTG CCAGGAGCTT
TACGAACGGT GCAAGTCACG GGGCTGTTTT GTAAATCCCG GCCATCACTT TTTCTTCGCC
CTTCCGGAGG AGGGGGAACC CTGGCCGCAC CGTCATGAAT GCATCCGCAT CAGCTTCACC
CAGACGGAGG AACTCCTGCG CAAGGGGCTT TCCATCGTGG CGGATGAAGT GCGCAAGGCC
TACTCCCGTT CTTAA
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| Protein sequence | MMQLSEIGGH LTARTGIDDL MEDLFKALHS GDAGLCQLNG GSPAVIPEVT ELWRRSMGEL
VRNGKFDVLV GHYAHPGGDP AFIRALVCFL NERCGWNLTP ENVAITQGGQ MACFTLFNML
AGPCPDGAVR EILFPLCPDY VGYQSQSLCG GVMFRGIRPG IRMLDGHTFK YVIDFDRLDI
RPETAAVCMS RPTNPTGNVV TDEELGLLRE MTSRAGVPLM IDNAYGPPLP NICFVPVTPA
WDENMILTMS LSKIGLPGTR TGIVIARPEI IRAVVSMVTT SSLCPNNLGQ ALVTPYLEDG
TLERVCRETL TPFYRGRAEF ALSLLPKLFG ESIPWRVHKS EGAMFLWLWF EGLPITCQEL
YERCKSRGCF VNPGHHFFFA LPEEGEPWPH RHECIRISFT QTEELLRKGL SIVADEVRKA
YSRS
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