Gene Amuc_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1459 
Symbol 
ID6275746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1750208 
End bp1750762 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content57% 
IMG OID642613519 
ProductGrpE protein 
Protein accessionYP_001878062 
Protein GI187735950 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AAGAGAAAGA GAAAAACGCG GAAGCGGAAG AGCTGGAGGC TCAGGAACAG 
GTGCAGGATG CTCCTGCCGA GGAGAAGGTG GCGGAACCTT CCCTGGAAGA GGAATTGCTT
AAATGGCGGG ATGCCGCCAT GCGCACTGCT GCGGAATATG ATAACTACCG CAAGCGCATG
GTGAAGGAAA AGGAGGAATG CGCCAAGTTC GCCAATCAGC GCCTGCTGGA AGAACTTCTA
CCCGTCATTG ATAATTTTGA AATGGGCATG GCCGCCGCCA GCGCAGATGC CTCCTCCATG
ATTTACATCG GCATGAGCAT GGTGAAGAAG CAGCTGGACG AATTTCTCGC CGGCAATGGC
GTGAGCGCCG TGGAGCCTGT GGTGGGAAGC ATGTTTGACC ACGCCACGGA GGAAGCTCTT
CAGCGGGAAC CCTCCGACCA GCCGGAAGGC ACCGTTCTGC GCGTTATCCG CAAGGGGTAT
ATGCTGAAAG ACAGGCTTCT GCGCCCGGCG AACGTGGTTG TCGCCCATAC TCCGGAACCC
GAACCGCAAG TCTGA
 
Protein sequence
MSDEEKEKNA EAEELEAQEQ VQDAPAEEKV AEPSLEEELL KWRDAAMRTA AEYDNYRKRM 
VKEKEECAKF ANQRLLEELL PVIDNFEMGM AAASADASSM IYIGMSMVKK QLDEFLAGNG
VSAVEPVVGS MFDHATEEAL QREPSDQPEG TVLRVIRKGY MLKDRLLRPA NVVVAHTPEP
EPQV