| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1409 |
|---|
| Symbol | |
|---|
| ID | 6274621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 1685144 |
|---|
| End bp | 1685596 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642613465 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001878013 |
|---|
| Protein GI | 187735901 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.523935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC TGCATAAGAA CATATTGTTT GCGGCGGCGG TACTGGCCAT GCCTTCTGCT
CTGGCCGATA TCCCGGAGTC TTCCGTTCCG GCTGCCGCCG TTTCCAGTAT CAAGGGTGCT
TATCCGAACG CCGGTCCCAT TGAATGGGAC TCTGAAATGC ATGGCATGGA AAGGATCTAC
GAAGCCGAAT TTAGAATTAA CGGATTCCAG TTTGACGTGA AGATTGCTCC TGATGGGAAA
ATTGTGAGGA TTAAGGAAGA AATAGCTGCT TCCTCTCTTC CGGAAGCCGT CCGTGCGTCC
GTTTTGAAGC GTTATCCGGG ATGCCGGATT AAGGAAGCGG AAAAAATTAC TGAAGGAGAA
CTTGTCCGTT ACAAGGTGGA AGTTGCGGAC AGCCGTGACG ATTATGATGT GCTGATTGCC
CCTGACGGAA ATATCCTTCA TGTGGACCGT TAG
|
|---|
| Protein sequence | MKKLHKNILF AAAVLAMPSA LADIPESSVP AAAVSSIKGA YPNAGPIEWD SEMHGMERIY
EAEFRINGFQ FDVKIAPDGK IVRIKEEIAA SSLPEAVRAS VLKRYPGCRI KEAEKITEGE
LVRYKVEVAD SRDDYDVLIA PDGNILHVDR
|
|---|
| |