| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1398 |
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| Symbol | |
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| ID | 6275778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1671073 |
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| End bp | 1671813 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642613455 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_001878003 |
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| Protein GI | 187735891 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0991365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTAAAG AATGTGGATG CGGGGGGGAG CTCTCCCATG AAAGTCACGG CCACGGCATG
GATGTCCATG TTCCGGTGTT GGATGCCAAT GACCGGCTGG CAGAGCGCAA CAGAGGTTTT
TTTGCTGCAA AAAACCTTTT GGTTATCAAT GTTTTTTCTT CTCCGGGGTC AGGAAAGACT
TCTCTGTTGC AGAAGACGGC GGAGATGCTC CGCGGCCGTG TGCGCATGGG GGTTATCGTA
GGGGATTTGG CGACGGATAA TGATGCGGAA CGCCTGAGCC GAGCGGATAT CCCCGTGGTG
CAGATTACAA CGGGCACCAT GTGCCATCTG GACGCCCGCA TGATTGCGGA GGCCATGAAG
AAAATGCCTC TGGACGATCT CGACGTTTTG ATTATTGAGA ATGTGGGCAA TCTGGTTTGC
CCGGCTTCCT ATGACCTGGG GGAAGGCGTG CGCGTGGTGC TGCTTTCCGT GACGGAGGGT
GAGGACAAGC CGTTGAAATA TCCTCCCATG TTCCATTCTG CGGATGTTGC CCTGGTGACC
AAGTCCGATC TGGCGGATGC CGTGGATTTT AACCGTGACG CCGCCCTGGC CGCGCTGAAC
AAGGTGGCTC ACCATGCGCA CGTGATTGAG GTTTCTTCCA AGACCGGCGA AGGAATGGAG
GCCTGGTGCG AGGAGATTGT GGAACGTGCG CGCCGCGCCC GGGAAGGCAC GATTCAGCAT
CATGGCCATC ACCACCATTG A
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| Protein sequence | MCKECGCGGE LSHESHGHGM DVHVPVLDAN DRLAERNRGF FAAKNLLVIN VFSSPGSGKT
SLLQKTAEML RGRVRMGVIV GDLATDNDAE RLSRADIPVV QITTGTMCHL DARMIAEAMK
KMPLDDLDVL IIENVGNLVC PASYDLGEGV RVVLLSVTEG EDKPLKYPPM FHSADVALVT
KSDLADAVDF NRDAALAALN KVAHHAHVIE VSSKTGEGME AWCEEIVERA RRAREGTIQH
HGHHHH
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