Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1379 |
Symbol | |
ID | 6274655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1644002 |
End bp | 1645114 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642613436 |
Product | ABC-2 type transporter |
Protein accession | YP_001877984 |
Protein GI | 187735872 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.463817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.000000727606 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACTTCC TGATCAGAAT AGCCTCCCTC GTCAGAAAAG AACTGCTGGC CGTGCTCAGG GACAAAAAAA GCCGGCTGGC CCTCATCATC CCTCCCATCA TCCAGATAGC CATCTTCGGC TATGCCGCCA CCATGAACGT CACCCGCGTG CCATACGCCG TGCTGGACAA AGACGGCGGA GAAGCGGCCG CCCAGTACAT CGCGGACCTG GAAGGCACGG GAATCTTCCG GCGCCAGGCC GCCGCGGCCA CGGAAAAAGA CATTGACCGC ATGATAGACA ACCGGGAAAT CGTCGTGGGG CTCACCATTC CGCCGGATTT CTCCCGCAAC ATTCAGACGG GGAGGCCCGC ATCTCTCCAG CTCATTGCGG ACGGGCGCAA CACGAATACG GCGGCCATCG CCCTCAGCTA CGGCCAGCAA ATCGCTGCCG CCTACGGGGC GGAACTGCTC TCCAAAAACG GCGGCTCCTC CCCGGTGGAA ACGGAATCCC GCGCCTGGTT CAACCCCAAC CTCATCACAC GCTGGTTCAT CGTTCCCGGC CTCATCGCCG TGCTCGTGCT CATCAACTCC ATCCTCTCCG GCGCGCTCTC CATCGCCCGC GAGCGGGAGG AAGGCACCTT CGACCAGCTT CTCGTCGCCC CATACACCCC GGGGGAAATC CTGCTCGGCA AGGGAACAGC CTCCGTCGTC ACCGGAATCA TGCAGGCCGT CTTCGTGGTG CTGGTTGCCA TGTTCTGGTT CCGCATCCCC TTCCAGGGCT CCGTCTGGCT GCTCTCCGCC GCCCTGCTGC TCTTCATCGT CACGGCGGCG GCCATCGGGC TGTGCATTTC CTCCTTCGCC CAATCCCTTC AGCAGGCTAT TGTGGGAACT TTCCTGCTGC TGGTGCCCAT GGTCATGCTC TCCGGCTTTG CCACGCCCAT CTCCAGCATG CCGGAAATCT TCCAGGACCT CACGCTGCTC AACCCCATGA GATACGGCCT GGAACTCATC CAGCGCATCT TTCTGGAAGG AGCCGGATTC CTGGATCTCT GGCCGCTTTT CGCGGCCATC ATGGCCGTTA CCGTGGCGGC CGTCCTGGCA GCCATCTTCT CTTTTCATCA TAAAATATCC TGA
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Protein sequence | MDFLIRIASL VRKELLAVLR DKKSRLALII PPIIQIAIFG YAATMNVTRV PYAVLDKDGG EAAAQYIADL EGTGIFRRQA AAATEKDIDR MIDNREIVVG LTIPPDFSRN IQTGRPASLQ LIADGRNTNT AAIALSYGQQ IAAAYGAELL SKNGGSSPVE TESRAWFNPN LITRWFIVPG LIAVLVLINS ILSGALSIAR EREEGTFDQL LVAPYTPGEI LLGKGTASVV TGIMQAVFVV LVAMFWFRIP FQGSVWLLSA ALLLFIVTAA AIGLCISSFA QSLQQAIVGT FLLLVPMVML SGFATPISSM PEIFQDLTLL NPMRYGLELI QRIFLEGAGF LDLWPLFAAI MAVTVAAVLA AIFSFHHKIS
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