| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1320 |
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| Symbol | |
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| ID | 6275796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1597950 |
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| End bp | 1598852 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642613376 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_001877925 |
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| Protein GI | 187735813 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.23225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCA TGGCAGACGC ATCCTCCAGG GAAGATATCT GGACAAAAAC CATGGACTTC
CTGAACATGC CGGACTGGCT CAAGCTGGAA ATGGTGCAGT CCGTGGGAAT CAAAATCCTG
CATGTGGCGG TATGGCTGGT GATCAGCTGG ATACTCCTGA AACTGTTCTG CCAGGTGCTC
CGGAAAATCA CTGCGTTGAA AATGTCGCCC CAGGCCTCCC GCCTGACGGT AAAAATCGTC
AAAAACGTCG GCTACATTAT TATAGGCGTG GAGGCCTTCG CCCTGATGGG GTTCGATATC
CTGACCCTGC TGGGCGCGGC CAGCATCATC GGCGTCGCCG TAGGCTTCGC CTCCCAGACC
TCCCTGTCCA ACATCATCAG CGGCCTCTTC CTGGTAGGGG AAAAGCAGAT CAACCTGGGG
GATATGATTG AAGTGAATGG AATCACCGGG AACGTGGACT CCATCAACCT GATGTCCGTC
CAGCTCCGGC TGCCGAACAA CACCATGGTG CGCATCCCCA ATGAAATAAT CATCAAGAAT
CCGGTCAGCA ATATCACCCG TTTTTCCACG CGCCGGTGCG ACCTGAGCCT GGGCGTGGAC
TATAACTGCG ACATTGAGCA TGTCGTGAAC GTCCTCCGGG AAGTAGTCAA ACAAAACAAA
TTCTGCCTGG ATGACCCCGC GCCCCTCATC TCGTTTTCAG GGTTCCAGGA CTCTTCCCTG
GGCTTTACCG TAGGGGCCTG GTGCCGGAAA GACAATTTCC TGGACTGCCA GAAAACGCTC
GCCCATGACA TCAAGCGCCG CTTTGAGGAA GAAGGCATTT CCTTCCCCTT CCCCACCCGC
AGCCTGGAGA GCAGAAGCCC CATCAAGGTG GAAATCTCCG GACCTCCGGA GAAAAATCAA
TAA
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| Protein sequence | MNLMADASSR EDIWTKTMDF LNMPDWLKLE MVQSVGIKIL HVAVWLVISW ILLKLFCQVL
RKITALKMSP QASRLTVKIV KNVGYIIIGV EAFALMGFDI LTLLGAASII GVAVGFASQT
SLSNIISGLF LVGEKQINLG DMIEVNGITG NVDSINLMSV QLRLPNNTMV RIPNEIIIKN
PVSNITRFST RRCDLSLGVD YNCDIEHVVN VLREVVKQNK FCLDDPAPLI SFSGFQDSSL
GFTVGAWCRK DNFLDCQKTL AHDIKRRFEE EGISFPFPTR SLESRSPIKV EISGPPEKNQ
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