| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1186 |
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| Symbol | |
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| ID | 6273827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1422095 |
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| End bp | 1423039 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613237 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001877792 |
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| Protein GI | 187735680 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0352655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTACGG TGTTCACGGT GCGCGCTTAT CCCGGGAGTG GCATGGACGC GAAAGATGCG
GAGAGGATTT GCGGGGAGGC TCTGGCCTGT GCCGTCCACT GGGAAAAAGT GATGTCCGCC
ATGGATGCGG AAAGCGGTCT GACCCGGCTT AATGCTGCGG AATACGGCAT TTCCGTGCCT
GTTTCTCCGG AATTGGAAAG GGTGCTTCTT CTGTCCCTGA ATTATGCCCG GCTGACAAAC
GGTGCTTTTG ATCCCACACT GGGACCCTGC ATTCGCCTGT GGAAAAAGAG CCGCCGCCTT
GGCGTCCTCC CGTCCGATGA GGAGCGGGAA TGCGCGCTCC GGGCATGCGG ATGGGAAAAG
TTGTCCGTCC GTAAGGGAAT GGCGGTCAAG GCGGTTTCTG GAATGAGGCT GGATTTGGGA
GGCATGGGCA AGGGCTTTGC CGTGGACCGA ATGGCGGAGA TGTTGAAAAC AAGGGGTATA
TGTTCCTTCT TCATAGACAG TACCAGCGAT GTTCTGGCCG GCGCTCCTCC TCCCGGGGAA
CCGGGATGGC GGCTGCGGGT GGATACAGGA AGAGGGCAGG GGGAAGTGTT GCTGTTGAGC
CATGCGGCCG TTTCCACTTC CGGGAGTGCC CGTCAGATGG TGAAAATTGG CGGGAAAGCG
TATTCCCACG TGCTTGATCC CCGGTCGGGG CTGGGCGTTA CGGAAGGGAG GCAGGTGAGC
GTCCGGGCGT CTTCCGCTGC GCTGGCGGAT GCCCTGGCGA CGGCAGGGTG TGTGATGCGT
GAGGAGGAGT TCCGTTCCCT GGCGGCCGGA TTGCCGGGAG TGTCCGTTCC GGCCTTTTTT
CAAAGTCCGC CATGTTCTGC GGGGGAAACG CAGAAACAGG ATGGACTGCG GAAGGAGGGA
GGAATGGGGT CAATGAAAGG AATGACAAAG CAACTACGTT TTTAA
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| Protein sequence | MGTVFTVRAY PGSGMDAKDA ERICGEALAC AVHWEKVMSA MDAESGLTRL NAAEYGISVP
VSPELERVLL LSLNYARLTN GAFDPTLGPC IRLWKKSRRL GVLPSDEERE CALRACGWEK
LSVRKGMAVK AVSGMRLDLG GMGKGFAVDR MAEMLKTRGI CSFFIDSTSD VLAGAPPPGE
PGWRLRVDTG RGQGEVLLLS HAAVSTSGSA RQMVKIGGKA YSHVLDPRSG LGVTEGRQVS
VRASSAALAD ALATAGCVMR EEEFRSLAAG LPGVSVPAFF QSPPCSAGET QKQDGLRKEG
GMGSMKGMTK QLRF
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