| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1145 |
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| Symbol | |
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| ID | 6273890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1372509 |
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| End bp | 1374116 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642613197 |
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| Product | hypothetical protein |
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| Protein accession | YP_001877752 |
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| Protein GI | 187735640 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0989818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0000170395 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAAAT ATTCATCCTG CCTTATCCAC CGGAATTTTC TGGTGGGAAT TAGCTATTCG
GACGCCACGC CCGGCCAGAG CTTCGCCTAC AATCCCTACG GAGAACTGGA AACCGACAAC
CTGCGAGTGG GCAACCACAC CCACCTCATC ACCGAGAAAA AAGACGCCTT CGGGCGCAGC
ACAGGCTACA TCTACGCGCG GAGCGGCGCG GCGCAGCACA CCGTAAGCAT CGGCTACGGG
GAAGACGGCC GCATCGCCAC GGCCGGGTTC CTGCAGGGCA GCGCGCCCCA GACCTTCACC
TGGCAATACA TGGAAGGAAG CGGCCTGCCC TCCGTGATGG CCATGCCCAA CGGCATGACG
CTGGAATGGG GCTATGAGGA AAAGCGGAAT CTGGTCTCTA CCATGGTCTA CAAACGCGGC
GCCACAAGAG TTGTGGAAAG GGAATACGTT TACGACAGCC TGGCAAGGCC CGTTACGCGG
CGCACGGCCC GCCAGGGGAA TACCGTCAAC GACAGCTTTG CCTGCAACAG CCGGAGCGAA
CTGACCGCCG CCACCGTCAG CGGCAAGACA TACGGCTACA GTTACGACAA CATAGGCAAC
CGGAAAACCG CGCGGGAAGA CGCGGAAGAA GCGACCGCCT ACACAACCGG CCCGCTCAAC
CAATACACCG CCATCGAGCG CGGAGAAGAA GCCGCCTTTG AGCCGGTTCA CGACGCGGAC
GGCAATCAGA CATTGATCAG GACATCCACC GGCATCTGGC AAGTCGCCTA CAACGCGGAA
AACCGCCCGG TGCGCTTCGT CAATGAAAGC GCCAAAACCG TGGTGGAATG CACCTACGAC
TACATGGGCA GGCGGCACAC CCGCAAAGTG AGCGTCAACG GGACGGTGAG CAGCTACCTG
CGCTACATGT ACCGTGGCTA CCTGCAAATA GCCGCCATAG ATGCCGTCAG CGGAGTCTTT
CGATGGTTCC TGTTCTGGGA CCCGACGCAG CCTGAGGCTG CGCGTCCGCT GGCCATCCGC
AAAGACGGCG CCTGGTACGC CTACGGGTGG GATCTGACCG GGAACGTCAC GGGAATCTTC
GGGAAAGCCG GTTACCTGCG GACGGTCTAC ACCTACACGC CTTACGGAGA AGTCACCGCC
GAAGGGGATG TCACCCAGCC CATCCAGTGG AGCAGCGAAT ACAGTGACGA AGAACTGGGG
TTGGTCTACT ACAACTACCG GCATCTCAAT CCGCACGACG GAAGGTGGAT CAGCCGCGAT
CCCATCGAGG AAGAAGGTGG TTGGAATTTG TTCGCGTTTG TAGGAAATAA AATTTTTAAT
CAATCTGATA TTTTAGGGTT GATATGTACA ATAGAATATA GTATAAAATT ACATACAATA
TTAATAAGGA AGGTAGATAA AGATAGTAAT ATACTTCGTT TAACGACGAG TAGAGTTTTT
TCTGGAAATG GTGATGGGAA AAATAATCCG GACAATGTTG GAAATAAAGA TAACGGTCCT
ATACCACCAG GGAAATACTA TGTGATAAAA AGACAATCTG GAGGAATTCG GAGCCAAATT
AAAGATTGGA CCTACAAATT ATGGAATGAT AATGATAAGA ATCAATAG
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| Protein sequence | MSKYSSCLIH RNFLVGISYS DATPGQSFAY NPYGELETDN LRVGNHTHLI TEKKDAFGRS
TGYIYARSGA AQHTVSIGYG EDGRIATAGF LQGSAPQTFT WQYMEGSGLP SVMAMPNGMT
LEWGYEEKRN LVSTMVYKRG ATRVVEREYV YDSLARPVTR RTARQGNTVN DSFACNSRSE
LTAATVSGKT YGYSYDNIGN RKTAREDAEE ATAYTTGPLN QYTAIERGEE AAFEPVHDAD
GNQTLIRTST GIWQVAYNAE NRPVRFVNES AKTVVECTYD YMGRRHTRKV SVNGTVSSYL
RYMYRGYLQI AAIDAVSGVF RWFLFWDPTQ PEAARPLAIR KDGAWYAYGW DLTGNVTGIF
GKAGYLRTVY TYTPYGEVTA EGDVTQPIQW SSEYSDEELG LVYYNYRHLN PHDGRWISRD
PIEEEGGWNL FAFVGNKIFN QSDILGLICT IEYSIKLHTI LIRKVDKDSN ILRLTTSRVF
SGNGDGKNNP DNVGNKDNGP IPPGKYYVIK RQSGGIRSQI KDWTYKLWND NDKNQ
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